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Submitted SNP(ss) Details: ss2758415589           
Submitter
HandleGNOMAD
Submitter SNP IDrs273884
RefSNP(rs#)rs273884
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2758415589|allelePos=26|len=51|taxid=9606|alleles='A/T'|mol=Genomic
 CTTTGACATC ACATAGAAAA TTTTG
 W
 ATTTCAAACA CATAATAGGT TTGAA

  Submitted Frequency for ss2758415589 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR832A=0.62500000
T=0.37500000
gnomad-AMRGNOMAD
FIN3494A=0.73239839
T=0.26760161
gnomad-FINGNOMAD
OTH978A=0.69734150
T=0.30265850
gnomad-OTHGNOMAD
NFE14966A=0.68288118
T=0.31711879
gnomad-NFEGNOMAD
AFR8710A=0.84110218
T=0.15889782
gnomad-AFRGNOMAD
ASJ302A=0.61589402
T=0.38410595
gnomad-ASJGNOMAD
EAS1620A=0.52901232
T=0.47098765
gnomad-EASGNOMAD
FEMALE13822A=0.73050207
T=0.26949790
gnomad-FEMALEGNOMAD
MALE17080A=0.71738875
T=0.28261125
gnomad-MALEGNOMAD


  dbSNP summary of Genotypes for ss2758415589 back to top
No sufficient data to compute Hardy-weinberg probability for ss2758415589.


  Submitted individual genotype for ss2758415589 back to top
There is no individual genotype data for ss2758415589.

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