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Submitted SNP(ss) Details: ss2758415897           
Submitter
HandleGNOMAD
Submitter SNP IDrs273882
RefSNP(rs#)rs273882
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2758415897|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 AGTGGTTATC ATAATAAGAA AAATT
 Y
 AAGGAAGTTA TAGGTAAAAT AAGAA

  Submitted Frequency for ss2758415897 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13750T=0.72909093
C=0.27090910
gnomad-FEMALEGNOMAD
NFE14942T=0.68270648
C=0.31729352
gnomad-NFEGNOMAD
AMR832T=0.62019229
C=0.37980768
gnomad-AMRGNOMAD
ASJ302T=0.61258280
C=0.38741723
gnomad-ASJGNOMAD
AFR8692T=0.84157848
C=0.15842153
gnomad-AFRGNOMAD
FIN3412T=0.73300117
C=0.26699883
gnomad-FINGNOMAD
EAS1610T=0.50496894
C=0.49503106
gnomad-EASGNOMAD
OTH976T=0.69569671
C=0.30430329
gnomad-OTHGNOMAD
MALE17016T=0.71609074
C=0.28390926
gnomad-MALEGNOMAD


  dbSNP summary of Genotypes for ss2758415897 back to top
No sufficient data to compute Hardy-weinberg probability for ss2758415897.


  Submitted individual genotype for ss2758415897 back to top
There is no individual genotype data for ss2758415897.

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