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Submitted SNP(ss) Details: ss2758636505           
Submitter
HandleGNOMAD
Submitter SNP IDrs17120680
RefSNP(rs#)rs17120680
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2758636505|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 GAGAGCCAAT TAACGTAAGG TGTAT
 Y
 TGGATTCTGT TTGATATAGC ATGAG

  Submitted Frequency for ss2758636505 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
MALE17076T=0.91748655
C=0.08251347
gnomad-MALEGNOMAD
EAS1610T=0.92360246
C=0.07639752
gnomad-EASGNOMAD
AFR8720T=0.87339449
C=0.12660551
gnomad-AFRGNOMAD
FIN3492T=0.92353952
C=0.07646048
gnomad-FINGNOMAD
ASJ302T=0.94039732
C=0.05960265
gnomad-ASJGNOMAD
FEMALE13836T=0.92317146
C=0.07682856
gnomad-FEMALEGNOMAD
NFE14974T=0.94229996
C=0.05770001
gnomad-NFEGNOMAD
AMR836T=0.96650720
C=0.03349282
gnomad-AMRGNOMAD
OTH978T=0.93047035
C=0.06952965
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2758636505 back to top
No sufficient data to compute Hardy-weinberg probability for ss2758636505.


  Submitted individual genotype for ss2758636505 back to top
There is no individual genotype data for ss2758636505.

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