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Submitted SNP(ss) Details: ss2758639862           
Submitter
HandleGNOMAD
Submitter SNP IDrs7554246
RefSNP(rs#)rs7554246
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2758639862|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 CACTGTTTCC AGTTTTTAGT AATTA
 Y
 GGATAAAGCT GCTCCAAACA TTTAT

  Submitted Frequency for ss2758639862 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR834T=0.76498801
C=0.23501199
gnomad-AMRGNOMAD
AFR8724T=0.85522693
C=0.14477304
gnomad-AFRGNOMAD
EAS1618T=0.98640299
C=0.01359703
gnomad-EASGNOMAD
FEMALE13810T=0.67233890
C=0.32766113
gnomad-FEMALEGNOMAD
FIN3494T=0.61476815
C=0.38523182
gnomad-FINGNOMAD
ASJ300T=0.53333336
C=0.46666667
gnomad-ASJGNOMAD
MALE17088T=0.69428837
C=0.30571160
gnomad-MALEGNOMAD
OTH976T=0.64754099
C=0.35245901
gnomad-OTHGNOMAD
NFE14952T=0.56942213
C=0.43057784
gnomad-NFEGNOMAD


  dbSNP summary of Genotypes for ss2758639862 back to top
No sufficient data to compute Hardy-weinberg probability for ss2758639862.


  Submitted individual genotype for ss2758639862 back to top
There is no individual genotype data for ss2758639862.

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