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Submitted SNP(ss) Details: ss2762318737           
Submitter
HandleGNOMAD
Submitter SNP IDrs16858667
RefSNP(rs#)rs16858667
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2762318737|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 ATTTTATATC TGCAATGTGG CTGTC
 Y
 CCGCTTCCCT GGACACGTGT ACCAA

  Submitted Frequency for ss2762318737 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
EAS1622T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
NFE14996T=1.00000000
C=0.00000000
gnomad-NFEGNOMAD
FEMALE13824T=0.99746817
C=0.00253183
gnomad-FEMALEGNOMAD
FIN3474T=1.00000000
C=0.00000000
gnomad-FINGNOMAD
ASJ302T=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
AMR836T=1.00000000
C=0.00000000
gnomad-AMRGNOMAD
MALE17096T=0.99672437
C=0.00327562
gnomad-MALEGNOMAD
AFR8714T=0.98955703
C=0.01044297
gnomad-AFRGNOMAD
OTH976T=1.00000000
C=0.00000000
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2762318737 back to top
No sufficient data to compute Hardy-weinberg probability for ss2762318737.


  Submitted individual genotype for ss2762318737 back to top
There is no individual genotype data for ss2762318737.

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