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Submitted SNP(ss) Details: ss2782564888           
Submitter
HandleGNOMAD
Submitter SNP IDrs2030162
RefSNP(rs#)rs2030162
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2782564888|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic
 AAGACCAGAC CATATCTCAG GATTC
 R
 GGTATCATTA TTTCAGAATT TAAGA

  Submitted Frequency for ss2782564888 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE14970G=0.52264529
A=0.47735471
gnomad-NFEGNOMAD
ASJ300G=0.56000000
A=0.44000000
gnomad-ASJGNOMAD
AMR834G=0.73860914
A=0.26139089
gnomad-AMRGNOMAD
AFR8700G=0.72827584
A=0.27172413
gnomad-AFRGNOMAD
FIN3488G=0.58199543
A=0.41800457
gnomad-FINGNOMAD
FEMALE13804G=0.60851926
A=0.39148074
gnomad-FEMALEGNOMAD
OTH982G=0.59877801
A=0.40122199
gnomad-OTHGNOMAD
EAS1612G=0.86848634
A=0.13151364
gnomad-EASGNOMAD
MALE17082G=0.61831164
A=0.38168833
gnomad-MALEGNOMAD


  dbSNP summary of Genotypes for ss2782564888 back to top
No sufficient data to compute Hardy-weinberg probability for ss2782564888.


  Submitted individual genotype for ss2782564888 back to top
There is no individual genotype data for ss2782564888.

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