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Submitted SNP(ss) Details: ss2785063754           
Submitter
HandleGNOMAD
Submitter SNP IDrs17448457
RefSNP(rs#)rs17448457
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/A/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2785063754|allelePos=26|len=51|taxid=9606|alleles='T/A/C'|mol=Genomic
 GGGTACTTAG GTCATACATG GGAAT
 H
 TGTGGGTAAT GAAGATTCCT GGGAC

  Submitted Frequency for ss2785063754 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE14966A=0.21388480
T=0.78611517
C=0.00000000
gnomad-NFEGNOMAD
FIN3488A=0.27580276
T=0.72419727
C=0.00000000
gnomad-FINGNOMAD
FEMALE13816A=0.17754777
T=0.82245225
C=0.00000000
gnomad-FEMALEGNOMAD
AFR8704A=0.08122702
T=0.91865808
C=0.00011489
gnomad-AFRGNOMAD
OTH976A=0.17827868
T=0.82172132
C=0.00000000
gnomad-OTHGNOMAD
MALE17072A=0.16928303
T=0.83065838
C=0.00005858
gnomad-MALEGNOMAD
AMR836A=0.12081340
T=0.87918663
C=0.00000000
gnomad-AMRGNOMAD
ASJ302A=0.19205298
T=0.80794704
C=0.00000000
gnomad-ASJGNOMAD
EAS1616A=0.08663366
T=0.91336632
C=0.00000000
gnomad-EASGNOMAD


  dbSNP summary of Genotypes for ss2785063754 back to top
No sufficient data to compute Hardy-weinberg probability for ss2785063754.


  Submitted individual genotype for ss2785063754 back to top
There is no individual genotype data for ss2785063754.

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