NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss2786531094           
Submitter
HandleGNOMAD
Submitter SNP IDrs78861870
RefSNP(rs#)rs78861870
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2786531094|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 CCTGAGAAGT CAAAGATCAG TCGCC
 Y
 ACTACCCCAC CCAAAGCGGG CCACA

  Submitted Frequency for ss2786531094 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
OTH982T=0.96435845
C=0.03564155
gnomad-OTHGNOMAD
FIN3492T=0.96878582
C=0.03121420
gnomad-FINGNOMAD
MALE17102T=0.95503449
C=0.04496550
gnomad-MALEGNOMAD
AMR836T=0.99162680
C=0.00837321
gnomad-AMRGNOMAD
EAS1622T=0.87731194
C=0.12268804
gnomad-EASGNOMAD
ASJ302T=0.96357614
C=0.03642384
gnomad-ASJGNOMAD
FEMALE13846T=0.95601618
C=0.04398382
gnomad-FEMALEGNOMAD
AFR8724T=0.91769832
C=0.08230170
gnomad-AFRGNOMAD
NFE14990T=0.98005337
C=0.01994663
gnomad-NFEGNOMAD


  dbSNP summary of Genotypes for ss2786531094 back to top
No sufficient data to compute Hardy-weinberg probability for ss2786531094.


  Submitted individual genotype for ss2786531094 back to top
There is no individual genotype data for ss2786531094.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement