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Submitted SNP(ss) Details: ss2789698909           
Submitter
HandleGNOMAD
Submitter SNP IDrs357116
RefSNP(rs#)rs357116
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2789698909|allelePos=26|len=51|taxid=9606|alleles='A/G'|mol=Genomic
 GGGGATTGGT TATCCCATGT TCCTT
 R
 GGCATAAATC ACCTTGCTCT GCAGA

  Submitted Frequency for ss2789698909 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13814G=0.51418853
A=0.48581150
gnomad-FEMALEGNOMAD
NFE14972G=0.55550361
A=0.44449639
gnomad-NFEGNOMAD
OTH980G=0.55816329
A=0.44183674
gnomad-OTHGNOMAD
EAS1614G=0.55824041
A=0.44175962
gnomad-EASGNOMAD
ASJ302G=0.59933776
A=0.40066224
gnomad-ASJGNOMAD
AMR838G=0.55847257
A=0.44152746
gnomad-AMRGNOMAD
MALE17076G=0.51791990
A=0.48208010
gnomad-MALEGNOMAD
AFR8692A=0.59698576
G=0.40301427
gnomad-AFRGNOMAD
FIN3492G=0.58132875
A=0.41867125
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2789698909 back to top
No sufficient data to compute Hardy-weinberg probability for ss2789698909.


  Submitted individual genotype for ss2789698909 back to top
There is no individual genotype data for ss2789698909.