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Submitted SNP(ss) Details: ss2800621705           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_3_149684965
RefSNP(rs#)rs1489824898
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed Allele-/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2800621705|allelePos=26|len=51|taxid=9606|alleles='-/A'|mol=Genomic
 AGTAGCCTTG TTTTTAATTG CGTCT
 N
 AAAAAAATAG GTTTACGATT TCTAA

  Submitted Frequency for ss2800621705 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
OTH978-=1.00000000
A=0.00000000
gnomad-OTHGNOMAD
AMR838-=1.00000000
A=0.00000000
gnomad-AMRGNOMAD
MALE17064-=0.99988282
A=0.00011721
gnomad-MALEGNOMAD
AFR8712-=0.99988520
A=0.00011478
gnomad-AFRGNOMAD
EAS1616-=1.00000000
A=0.00000000
gnomad-EASGNOMAD
NFE14976-=0.99993324
A=0.00006677
gnomad-NFEGNOMAD
FEMALE13832-=1.00000000
A=0.00000000
gnomad-FEMALEGNOMAD
FIN3474-=1.00000000
A=0.00000000
gnomad-FINGNOMAD
ASJ302-=1.00000000
A=0.00000000
gnomad-ASJGNOMAD


  dbSNP summary of Genotypes for ss2800621705 back to top
No sufficient data to compute Hardy-weinberg probability for ss2800621705.


  Submitted individual genotype for ss2800621705 back to top
There is no individual genotype data for ss2800621705.

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