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Submitted SNP(ss) Details: ss2808759522           
Submitter
HandleGNOMAD
Submitter SNP IDrs2271173
RefSNP(rs#)rs2271173
Submitted Batch IDgenome_batch_chr4
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2808759522|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic
 TTATGGAATA AAATGAATAC TTACT
 R
 CTCTCAAAAA GATTGTATTT TTCAC

  Submitted Frequency for ss2808759522 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
OTH978G=0.61145192
A=0.38854805
gnomad-OTHGNOMAD
FEMALE13822G=0.61901319
A=0.38098684
gnomad-FEMALEGNOMAD
AMR832G=0.51322114
A=0.48677886
gnomad-AMRGNOMAD
ASJ302G=0.70198673
A=0.29801324
gnomad-ASJGNOMAD
MALE17076G=0.60892481
A=0.39107519
gnomad-MALEGNOMAD
AFR8718G=0.66620785
A=0.33379215
gnomad-AFRGNOMAD
EAS1616A=0.91089112
G=0.08910891
gnomad-EASGNOMAD
NFE14968G=0.64444149
A=0.35555851
gnomad-NFEGNOMAD
FIN3484G=0.60820895
A=0.39179105
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2808759522 back to top
No sufficient data to compute Hardy-weinberg probability for ss2808759522.


  Submitted individual genotype for ss2808759522 back to top
There is no individual genotype data for ss2808759522.

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