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Submitted SNP(ss) Details: ss28461006           
Submitter
HandleKYUGEN
Submitter SNP IDQH01643
RefSNP(rs#)rs17033
Submitted Batch IDA040519
Submitted DateJul 07, 2004
Publication CitedN.D.
First entry to dbSNPJul 7 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFINDING BY SSCP AND SEQUENCING
Ascertainment Samplesize16
PopulationKG-POP3
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Homozygote DetectedY
PCR ConfirmedY
Variation
Frequency Submissionpopulation count: 2
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss28461006|allelePos=146|len=377|taxid=9606|alleles='A/G'|mol=Genomic
 CTTTGACTCT CACAACAAGC ATGTGGGTTG TCTAAATGTT AACACAATGT CTCTTCTTTC
 CTATTGCAGT ATCCGTACCG TCCTGACGTT TTGAGGCAAT AGAGATGCCT TCCCCTGTAG
 CAGTCTTCAG CCTCCTCTAC CCTAC
 R
 AGATCTGGAG CAACAGCTAG GAAATATCAT TAATTCAGCT CTTCAGAGAT GTTATCAATA
 AATTACACAT GGGGGCTTTC CAAAGAAATG GAAATTGATG GGAAATTATT TTTCAGGAAA
 ATTTAAAATT CAAGTGAGAA GTAAATAAAG TGTTGAACAT CAGCTGGGGA ATTGAAGCCA
 ACAAACCTTC CTTCTTAACC ATTCTACTGT GTCACCTTTG CCATTGAGGA A

  Submitted Frequency for ss28461006 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
CP
MULTI-NATIONAL
156A=0.93000001
G=0.07000000
0.130 +/-0.050P040519KYUGEN
JPK2
EAST ASIA
200A=0.93000001
G=0.07000000
0.130 +/-0.044P040519KYUGEN


  dbSNP summary of Genotypes for ss28461006 back to top
No sufficient data to compute Hardy-weinberg probability for ss28461006.


  Submitted individual genotype for ss28461006 back to top
There is no individual genotype data for ss28461006.

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