Submitted SNP(ss) Details: ss28461090

Submitted SNP(ss) Details: ss28461090

Submitter
Handle	KYUGEN
Submitter SNP ID	QH05830
RefSNP(rs#)	rs778593
Submitted Batch ID	A040519
Submitted Date	Jul 07, 2004
Publication Cited	N.D.
First entry to dbSNP	Jul 7 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_029289.10
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	FINDING BY SSCP AND SEQUENCING
Ascertainment Samplesize	16
Population	KG-POP3

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable
Homozygote Detected	Y
PCR Confirmed	Y

Variation
Frequency Submission	population count: 2
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GGGGGCTTCC CTCAACTTCA GGGAGGTCGA GGTCGTGACC CTGGCGTCCC GAAGCCCGCC
 CGCCTCACCA CGCCGCGCCT CACCTGACGC CCTGGCTGCC GGGCGAGCGC TGACATAAGT
 GGATGCGAAT CTCACGCAGG CCCAGCTTTG CCCCGACTCC TCGACTTGCT GCGGCCGCCG
 CCATCCTTGT TAATATCGAA GTCGCCAATT CCAGGTCTTC AGGCCAAGTG C
 Y
 CCGGTCTGAC CAACCGCGGA CCCTAAAGCC TAGCCCATAG GCTGCATGAG GCAGGGGCGG
 GGTAAAGCTT GGCCAATGAT ATAAAAGYAT TGTAGGACCG CTGCGAGG

Submitted Frequency for ss28461090

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CP - MULTI-NATIONAL	156	T=0.55000001	C=0.44999999	0.495 +/-0.011			P040519	KYUGEN
JPK2 - EAST ASIA	200	C=0.52999997	T=0.47000000	0.498 +/-0.006			P040519	KYUGEN

dbSNP summary of Genotypes for ss28461090

No sufficient data to compute Hardy-weinberg probability for ss28461090.

Submitted individual genotype for ss28461090

There is no individual genotype data for ss28461090.

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