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Submitted SNP(ss) Details: ss28503392           
Submitter
HandleIMCJ-GDT
Submitter SNP IDIMCJ-PTEN_2-CT
RefSNP(rs#)rs17849090
Submitted Batch ID0410_0408201941_SA
Submitted DateAug 20, 2004
Publication Cited[1] Systematic survey of candidate gene polymorphisms in metabolic diseases.
First entry to dbSNPAug 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIMCJ-DSEQ
Ascertainment Samplesize96
PopulationIMCJ-JP2
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss28503392|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 GAATCCATAT TTCGTGTATA TTGCTGATAT TAATCATTAA AATCGTTTTT GACAGTTTGA
 CAGTTAAAGG CATTTCCTGT GAAATAATAC TGGTATGTAT TTAACCATGC AGATCCTCAG
 TTTGTGGTCT GCCAGCTAAA GGTGAAGATA TATTCCTCCA ATTCAGGACC CACACGACGG
 GAAGACAAGT TCATGTACTT
 Y
 GAGTTCCCTC AGCCGTTACC TGTGTGTGGT GATATCAAAG TAGAGTTCTT CCACAAACAG
 AACAAGATGC TAAAAAAGGT TTGTACTTTA CTTTCATTGG GAGAAATATC CAAAATAAGG
 ACAGATTAAA AGCTATATTT TATTTTATGA CATGTAAGGA ACTATAATTT GTTTTCTATT
 AGATCTGCAG GTGTTTTGCT

  Submitted Frequency for ss28503392 back to top
There is no frequency submission for ss28503392.


  dbSNP summary of Genotypes for ss28503392 back to top
No sufficient data to compute Hardy-weinberg probability for ss28503392.


  Submitted individual genotype for ss28503392 back to top
There is no individual genotype data for ss28503392.

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