>gnl|dbSNP|ss2874205|allelePos=822|len=1888|taxid=9606|alleles='C/T'|mol=Genomic
TTGCTACATA AGTGTGTTTA AAATTGACAA CAGCAGTTAC TACCTATTGT CAATGCATTT
CGTCAAAATC CTTTTGATGT ACCAAAAAAG AGAAAAGGTG GGGAAAGGGG GAAGAATATG
TATGCTGTCA GACTTAAAGG AGAGTTCTTC CTATCCAGAG AGGAGCTGTG TTAAAATTAC
CCCACTCGTG GATTTATATC TATCCCCACA CAGACACTTT TTTCTTTTGC ATGGGTCAAT
GAAAAATTCA CTAAGGACCG GGGTTTAGAA ATCACTGAGT AGCTCAACTA ACCCTTCTTT
GATATTTGGA TCCTTTTATA TAATCTCTGT AAGTGGTCTT CCGGTAATAC CTGAACATTG
CAAGTAACGG GTGGTGATTT CCACCTTTTA ATGGTTTTGA GTACTAGAAA GTTTTTTGGC
CTATAGAATT GAAATCTGAT TCTGCTTGTT TATTCAAATT CTACTGCCTT GGTGGCCTAC
AGAACAAATC CTTCAGTCTC TGTCAGAGTT GGGCTCTTGG TGTAACGTGA CCCGTGAACA
TGACCTGTGT AGAGTACAGC AGGAGTGTCT TGTCATAGGT TGCATGTTGC TTGCACTGAT
GTAGTACAAG TTTGCATTTA CTTTTCTGGT GGCCAGACTC AACGAGTTTC CTTTTCGCTA
AAACCTGCCG AGCCGTTAAT CACATGCTGC CATTGAACCT CGTCTTTCCA TCTTGCGCTG
ATGTCATTGC AAAACCTAAC ATTTATTGCG CTGTGGTTTT GCTTTATTTT AGCTGATTCT
TTCCATCATG CTTTTTAGAA TTTGATTATA TTATTTGGCA C
Y
TTTACCTGTC CTCCCAAAGA AATGCTGTCT GTACATTATT AGATCAGACT CTTTTATATC
TTTACTTAAG CCGGTGATGA AATTGTTAAA CTGGCTGAAC AACACGAAGT GTGTCTCTGG
AAGCTTCCCT CGAGGCTTAC AAGGAGTCAC ACTCTCGGTT ATAGTTAACT ACTAATGCTC
TTCATATCTT ATAACTAGCC CATATAGCTC CACCTTTCCA CATGGATATC CTGAAAGAGT
GTGTCAAACC TCCTTTGCTG GTTCTACTGA CCAAGTTATG CTGAGTAATA ATGAGTTCAT
TTTCAGTGTG TCCCTAGTAA CGAGCACTCT CTTCTGCATA TGATTAAGAA AATGTGTTAA
ATGACTGACT GGATTGAGAC ACTAGGGTCA CACTGTGATC TGTGACCTCC GGAGGCCTTA
GGAACTGCAG TGCTTCTAGG AAAAATCAGA ATATTGTTGG ACTTTCTTCA GCTTATTTTT
TGGTTTGGTA TTCTCTTGTG TTGAATTGCT TTCAGATAGT GGGGAAGAAC ACCACAGTCT
CTTCCGGTTT TGTTTTAATT GGTTGATATA CTTCTCTTCC TATTTTACTA ATAAACATTT
AGCCAAAAGG GGTGTCTTGA ACTCTGCCCA TTAGATTACT CCATATTTTT CACTTCTACA
TATTTGCTTA ATCTTCTGAG AAATATCCCC ATTTAGTTGA GTTCCTCAAG AAATCAGAAC
AGTCCGAAGT AAGCTATCTG GTAGTTTATT CAAACTCTTA AGTAAAAATA TCTAGGTAAA
GAGCCAGTGT TAAAAATTGT TATTGTGGAA AGTAAGAACT CCTGGGTGAA TAAAAGATTA
TGTCTGCTGA GATGAACTAT TGTGTGGAGT TTTAAAAGAA AGTTCTGGTT AATGCTTAAG
ACATAGTGTC CTGTGAAGTC AGCATAACTA CTTTCACTGT CTTCTGGAGG TGGTTTTGAT
AACACATTTG GTTCCTTGTT GAACAGTGGG TATTCACATT GTTCAGGAAT AGCTTTGGGA
TACTGTCCTC TCCGTATTGA AGTTTCTAAT AAGTAATTTT AGGAAT
Population ID -Class | Total Sample (2N) | Founder (2N) | Major Allele Freq. | Minor Allele Freq. | Genotype Freq. | HWE Goodness of Fit | Data Source | Caucasian | 20 | 20 | T=0.55000001
| C=0.44999999 | T/T=0.40000001 C/C=0.30000001 C/T=0.30000001
| Pr(chiSq=1.552,df=1) =0.251 | Genotype Freq. |
PDpanel | 48 | 48 | C=0.52083331
| T=0.47916666 | C/T=0.37500000 C/C=0.33333334 T/T=0.29166666
| Pr(chiSq=1.484,df=1) =0.251 | Genotype Freq. |
HapMap-CEU | 220 | 220 | C=0.50909090
| T=0.49090910 | C/T=0.50909090 C/C=0.25454545 T/T=0.23636363
| Pr(chiSq=0.038,df=1) =1.000 | Genotype Freq. |
HapMap-HCB - EAST ASIA | 84 | 84 | C=0.67857140
| T=0.32142857 | C/C=0.52380955 C/T=0.30952382 T/T=0.16666667
| Pr(chiSq=3.543,df=1) =0.100 | Genotype Freq. |
HapMap-JPT | 170 | 170 | C=0.70588237
| T=0.29411766 | C/C=0.48235294 C/T=0.44705883 T/T=0.07058824
| Pr(chiSq=0.500,df=1) =0.527 | Genotype Freq. |
HapMap-YRI | 224 | 224 | T=0.67410713
| C=0.32589287 | T/T=0.46428570 C/T=0.41964287 C/C=0.11607143
| Pr(chiSq=0.226,df=1) =0.655 | Genotype Freq. |
HAPMAP-ASW | 98 | 98 | T=0.69387758
| C=0.30612245 | C/T=0.48979592 T/T=0.44897959 C/C=0.06122449
| Pr(chiSq=1.146,df=1) =0.294 | Genotype Freq. |
HAPMAP-CHB | 80 | 80 | C=0.66250002
| T=0.33750001 | C/C=0.44999999 C/T=0.42500001 T/T=0.12500000
| Pr(chiSq=0.098,df=1) =1.000 | Genotype Freq. |
HAPMAP-GIH | 176 | 176 | T=0.61931819
| C=0.38068181 | C/T=0.44318181 T/T=0.39772728 C/C=0.15909091
| Pr(chiSq=0.318,df=1) =0.584 | Genotype Freq. |
HAPMAP-LWK | 180 | 180 | T=0.70555556
| C=0.29444444 | T/T=0.50000000 C/T=0.41111112 C/C=0.08888889
| Pr(chiSq=0.010,df=1) =1.000 | Genotype Freq. |
HAPMAP-MKK | 286 | 286 | T=0.61188811
| C=0.38811189 | C/T=0.42657343 T/T=0.39860141 C/C=0.17482518
| Pr(chiSq=1.484,df=1) =0.251 | Genotype Freq. |
HAPMAP-TSI | 176 | 176 | C=0.55681819
| T=0.44318181 | C/T=0.45454547 C/C=0.32954547 T/T=0.21590909
| Pr(chiSq=0.549,df=1) =0.479 | Genotype Freq. |