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Submitted SNP(ss) Details: ss298175           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-305968
RefSNP(rs#)rs230490
Submitted Batch IDOVLP-000621-3
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC021120 SequenceAccession1:AC021120 SequenceContigName1:Contig6 SequenceContigPosition1:6778 SequenceLocalName2:AF213884 SequenceAccession2:AF213884 SequenceContigName2:Contig1 SequenceContigPosition2:31006 PolyBayesConfidence:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss298175|allelePos=101|len=201|taxid=9606|alleles='T/C'|mol=Genomic
 AGAAACTAGA TGTACTTAGC ATAGATATTA GGAAAGCTTT GGACCATTAA TTTTACATAT
 TCTGTGGGAT GAGAAGTTCA AAGAAGTTGA AGTTGACAGC
 Y
 TAGGTCTGAG AAGACCCCAA CTCAAGCCCT GTAAGACATG AAGATTTAAT TAGAATATTT
 ACATGCCAAG TTATCTCCAA GAAATGGCAT AAAAAGAGAA

  Submitted Frequency for ss298175 back to top
There is no frequency submission for ss298175.


  dbSNP summary of Genotypes for ss298175 back to top
No sufficient data to compute Hardy-weinberg probability for ss298175.


  Submitted individual genotype for ss298175 back to top
There is no individual genotype data for ss298175.

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