NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3006890001           
Submitter
HandleSWEGEN
Submitter SNP IDNC_000010.10:g.89727414C>T
RefSNP(rs#)rs11202607
Submitted Batch IDSWEGEN
Submitted DateMay 30, 2017
Publication CitedN.D.
First entry to dbSNPMay 30 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA_WGS
Ascertainment Samplesize2000
PopulationSWEGEN
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3006890001|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 CAATTTCGGG CACCGCATAT TAAAA
 Y
 GTAACTTTAT TGTTCCAATA TGTAA

  Submitted Frequency for ss3006890001 back to top
There is no frequency submission for ss3006890001.


  dbSNP summary of Genotypes for ss3006890001 back to top
No sufficient data to compute Hardy-weinberg probability for ss3006890001.


  Submitted individual genotype for ss3006890001 back to top
There is no individual genotype data for ss3006890001.