NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss328357228           
Submitter
Handle1000GENOMES
Submitter SNP ID20100804_snps_764_chr1_730087
RefSNP(rs#)rs148120343
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPMar 22 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize1258
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:2590

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss328357228|allelePos=51|len=101|taxid=9606|alleles='T/C'|mol=Genomic
 TCTGAAAATG GAGTTTTTCA TCCCTTCCTT CCAATTCTCC TTCCAGCCTT
 Y
 CTTGATTTCC AGAATGAGAA ATCATTAAGT CATATACTGA GCCACAAATA

  Submitted Frequency for ss328357228 back to top
There is no frequency submission for ss328357228.


  dbSNP summary of Genotypes for ss328357228 back to top
No sufficient data to compute Hardy-weinberg probability for ss328357228.


  Submitted individual genotype for ss328357228 back to top
There is no individual genotype data for ss328357228.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement