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Submitted SNP(ss) Details: ss334772660           
Submitter
Handle1000GENOMES
Submitter SNP ID20100804_snps_6416201_chr8_27320636
RefSNP(rs#)rs56298562
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPMar 22 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize1258
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginT:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:2107

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss334772660|allelePos=51|len=101|taxid=9606|alleles='G/A'|mol=Genomic
 ACCCTCCTGC AGCAGAGCCT CAGCCTTGGG ACCTGAGGCC CCAGAGTGCA
 R
 GTGGCCGTGG CTGCAGAGGG TGCCCACAGA GGGGGCCACA TGACCTGCAC

  Submitted Frequency for ss334772660 back to top
There is no frequency submission for ss334772660.


  dbSNP summary of Genotypes for ss334772660 back to top
No sufficient data to compute Hardy-weinberg probability for ss334772660.


  Submitted individual genotype for ss334772660 back to top
There is no individual genotype data for ss334772660.