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Submitted SNP(ss) Details: ss336289260           
Submitter
Handle1000GENOMES
Submitter SNP ID20100804_snps_7932801_chr10_89686083
RefSNP(rs#)rs34382179
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPMar 22 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize1258
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:2163

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss336289260|allelePos=51|len=101|taxid=9606|alleles='T/C'|mol=Genomic
 ATATCTATAA ATTATAGATA GGAAAAATTT ATCTGTAATT TAGTGATCTT
 Y
 CTAGTGTGAT AAAACGTCAG AAGTACTGAG AGTGGAGTGG ACATTGATAT

  Submitted Frequency for ss336289260 back to top
There is no frequency submission for ss336289260.


  dbSNP summary of Genotypes for ss336289260 back to top
No sufficient data to compute Hardy-weinberg probability for ss336289260.


  Submitted individual genotype for ss336289260 back to top
There is no individual genotype data for ss336289260.