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Submitted SNP(ss) Details: ss341932891           
Submitter
HandleNHLBI-ESP
Submitter SNP IDESP2500-chr1-11710561
RefSNP(rs#)rs9614
Submitted Batch IDESP2500
Submitted DateMar 25, 2011
Publication CitedN.D.
First entry to dbSNPMar 25 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		genomic
MethodEXOME CAPTURE AND SEQUENCING
Ascertainment Samplesize3482
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss341932891|allelePos=251|len=501|taxid=9606|alleles='T/G'|mol=Genomic
 CCCGCCCTGC CCCAGCTGGC TGAGGGTGGG AGGACCCGGG AGACCCCAGG GCACAGGTGG
 CCAGAGAGCT ACAGTAATAG ACAGCCTTGG GGCTACCCAG TGCTGGCACT GAGCCAGGCG
 CTTAATCCCA TTTCTCCCTC AAAGCCAGGC GGCGCCGTTT CGGCCCATTT CGCAGCAGGG
 GAAGCTGAGC TCGCCCAGCG AGGGCCTCTC ACCTTCCCCA CACGGGTTAC GCAGAAGGTT
 GCGGCGCCGC
 K
 TGCTCAGGAA GTAGAACTGC TGCCAGTGGT CGCGCTCCTC CTCCACGCCG CCCTCGGGCA
 CCAGCCCCTC CTGCTGGCAC TTGAGCAGCC ACAGCGGGGC GCCGTCCACC AGCTCCTTCC
 AGCGCAGGCA CACCAGGCGG CAGGCCTGCA CCAGCTCGGC GGCCGGCAGT GCGGCCAGCA
 CGCGCAGCAG CAGCGGCTCG GGCAGCTCGT CCAGGTACGC GGCGGCGGCC GCCGCCTCCT
 CCTCCTGCTG

  Submitted Frequency for ss341932891 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
ESP_Cohort_Populations
- NORTH AMERICA 		12994T/T=0.66600001
G/T=0.30121601
G/G=0.03278400
ESP6500SINHLBI-ESP


  dbSNP summary of Genotypes for ss341932891 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
ESP_Cohort_Populations
- NORTH AMERICA 		34823482T=0.82251579
G=0.17748420T/T=0.67489946
G/T=0.29523262
G/G=0.02986789
Pr(chiSq=0.218,df=1)
=0.655		Genotype
Freq.

  Submitted individual genotype for ss341932891 back to top
There is no individual genotype data for ss341932891.

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