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Submitted SNP(ss) Details: ss35236232           
Submitter
HandleSSAHASNP
Submitter SNP IDTA-079.chrM_11252
RefSNP(rs#)clustering in process
Submitted Batch IDTA-079
Submitted DateMar 11, 2005
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 11 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTA-079
Ascertainment Samplesize21
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityUI-E-CL0-abz-b-08-0-UI.r1 202 37UI-E-CI0-aac-d-10-0-UI.s1 -349 35UI-E-CL1-afg-m-20-0-UI.r2 216 51UI-E-CI1-agf-g-03-0-UI.s1 -253 39UI-E-CL0-acd-h-08-0-UI.r1 335 42UI-H-FL1-bgw-o-14-0-UI.s1 -167 35UI-E-CI0-aak-c-01-0-UI.r1 666 27UI-H-FL1-bgv-n-24-0-UI.s1 -537 27UI-E-CQ0-adt-g-10-0-UI.r1 430 29UI-E-CI0-aac-d-10-0-UI.r1 374 38UI-E-CI1-agf-g-03-0-UI.r1 222 45UI-E-CL1-afc-k-20-0-UI.r1 143 43UI-E-CK0-aao-h-10-0-UI.r1 414 42xan43f12.g1 203 38UI-E-DX0-ags-j-15-0-UI.r1 291 44UI-E-CR0-aci-h-05-0-UI.r1 221 56UI-E-DW0-agk-c-05-0-UI.r1 363 40UI-E-CL1-afc-k-20-0-UI.s1 -404 23UI-E-CL0-acf-d-03-0-UI.r1 421 43UI-E-CL1-afg-m-20-0-UI.r1 247 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35236232|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 ATACTAATCT CCCTACAAAT CTCCTTAATT ATAACATTCA CAGCCACAGA ACTAATCATA
 TTTTATATCT TCTTCGAAAC CACACTTATC CCCACCTTGG CTATCATCAC CCGATGAGGC
 AACCAGCCAG AACGCCTGAA CGCAGGCACA TACTTCCTAT TCTACACCCT AGTAGGCTCC
 CTTCCCCTAC TCATCGCACT
 R
 ATTTACACTC ACAACACCCT AGGCTCACTA AACATTCTAC TACTCACTCT CACTGCCCAA
 GAACTATCAA ACTCCTGAGC CAACAACTTA ATATGACTAG CTTACACAAT AGCTTTTATA
 GTAAAGATAC CTCTTTACGG ACTCCACTTA TGACTCCCTA AAGCCCATGT CGAAGCCCCC
 ATCGCTGGGT CAATAGTACT

  Submitted Frequency for ss35236232 back to top
There is no frequency submission for ss35236232.


  dbSNP summary of Genotypes for ss35236232 back to top
No sufficient data to compute Hardy-weinberg probability for ss35236232.


  Submitted individual genotype for ss35236232 back to top
There is no individual genotype data for ss35236232.