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Submitted SNP(ss) Details: ss35414125           
Submitter
HandleSSAHASNP
Submitter SNP IDTA-079.chrM_3481
RefSNP(rs#)rs28358584
Submitted Batch IDTA-079
Submitted DateMar 11, 2005
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 11 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTA-079
Ascertainment Samplesize45
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22S732-27l16.q1k 147 51UI-E-DX0-agq-b-06-0-UI.r1 264 25S1C_2-65e22.q1k 255 41UI-E-CI0-aai-b-06-0-UI.r1 197 31912S-956j02.q1k 231 45912S-881n24.q1k 482 45S1C_2-584c09.q1k 106 45UI-E-CL0-abu-c-11-0-UI.r1 219 4313S07_2-398g19.q1k 134 37912S-962o06.q1k 146 40912S3-111n14.q1k 175 29912S-1462m05.p1k 556 35912S-204n16.q1k 252 35912S3-363c08.q1k 79 32S1C_2-765h17.q1k 488 40UI-E-CI0-aaa-g-02-0-UI.r1 209 4613S07_2-507o21.q1k 201 42912S-395p14.p1k -122 5122S732-303m08.q1k 111 45UI-E-CL1-aeq-e-08-0-UI.r1 329 56S6C_2-712c08.q1k 313 40UI-E-DX0-agn-c-20-0-UI.r1 260 56UI-E-DW0-agm-h-23-0-UI.r1 191 56S1C_2-750d02.q1k 271 41UI-E-CL1-afd-n-20-0-UI.r1 274 42UI-E-CI0-aah-e-11-0-UI.r1 241 25912S-471d20.p1k 583 51912S-737a22.q1k 379 41912S3-675m18.q1k 96 3913S07_2-408k03.q1k 265 51UI-E-CL0-aby-h-11-0-UI.r1 130 40S6C_2-132n06.q1k 110 32912S-396l20.p1k -499 56S1C_2-181a01.q1k 552 45912S-992o20.q1k 667 2520SNP44340-1749h07.q1c 127 29912S3-682f01.q1k 638 45912S-1206f02.q1k 442 43912S-1097f12.q1k 483 3522S732-69p05.q1k -86 3522S732-339c07.q1k -178 56S1C_2-712e09.q1k 298 40912S-926h16.q1k 476 43S6C_2-249g15.q1k 449 43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35414125|allelePos=279|len=479|taxid=9606|alleles='A/G'|mol=Genomic
 TACCCACACC CACCCAAGAA CAGGGTTTGT TAAGATGGCA GAGCCCGGTA ATCGCATAAA
 ACTTAAAACT TTACAGTCAG AGGTTCAATT CCTCTTCTTA ACAACATACC CATGGCCAAC
 CTCCTACTCC TCATTGTACC CATTCTAATC GCAATGGCAT TCCTAATGCT TACCGAACGA
 AAAATTCTAG GCTATATACA ACTACGCAAA GGCCCCAACG TTGTAGGCCC CTACGGGCTA
 CTACAACCCT TCGCTGACGC CATAAAACTC TTCACCAA
 R
 GAGCCCCTAA AACCCGCCAC ATCTACCATC ACCCTCTACA TCACCGCCCC GACCTTAGCT
 CTCACCATCG CTCTTCTACT ATGAACCCCC CTCCCCATAC CCAACCCCCT GGTCAACCTC
 AACCTAGGCC TCCTATTTAT TCTAGCCACC TCTAGCCTAG CCGTTTACTC AATCCTCTGA
 TCAGGGTGAG CATCAAACTC

  Submitted Frequency for ss35414125 back to top
There is no frequency submission for ss35414125.


  dbSNP summary of Genotypes for ss35414125 back to top
No sufficient data to compute Hardy-weinberg probability for ss35414125.


  Submitted individual genotype for ss35414125 back to top
There is no individual genotype data for ss35414125.