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Submitted SNP(ss) Details: ss3548490           
Submitter
HandleSC_JCM
Submitter SNP IDAC005603.1_11669
RefSNP(rs#)rs2531228
Submitted Batch ID21-SEP-2001c
Submitted DateSep 24, 2001
Publication Cited[1] Clone overlap SNPs detected from the public human 19-Mar-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPSep 24 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AC005603.1position:11669seqversion:AC005604.1position:11213seqversion:AC073186.2position:109618unfin_quality:90

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3548490|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AGCCCTGAAC TGAGATTTGA CTTTACCTTG AGCTTTGTCA GTTTACGATG CTATTTCAGT
 TTTGTGCTCA GATTTGAGTG ATTGCAGGAA GAGAATAAAT TTCTTTAATG CTGTCAAGAC
 TTTAAATAGA TACAGACAGA GCATTTTCAC TTTTTCCTAC ATCTCTATTA TTCTAAAAAT
 GAGAACATTC CAAAAGTCAA
 Y
 CATCCAAGTT TATTCTAAAT AGATGTGTAG AAATAACAGT TGTTTCACAG GAGACTAATC
 GCCCAAGGAT ATGTGTTTAG AGGTACTGGT TTCTTAAATA AGGTTTTCTA GTCAGGCAAA
 AGATTCCCTG GAGCTTATGC ATCTGTGGTT GATATTTTGG GATAAGAATA AAGCTAGACA
 TGGTGAGGCA TATTCAATTT

  Submitted Frequency for ss3548490 back to top
There is no frequency submission for ss3548490.


  dbSNP summary of Genotypes for ss3548490 back to top
No sufficient data to compute Hardy-weinberg probability for ss3548490.


  Submitted individual genotype for ss3548490 back to top
There is no individual genotype data for ss3548490.