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Submitted SNP(ss) Details: ss355820           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-126000
RefSNP(rs#)rs54790
Submitted Batch IDOVLP-000621-1
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC025489 SequenceAccession1:AC025489 SequenceContigName1:Contig9 SequenceContigPosition1:9886 SequenceLocalName2:AC025706 SequenceAccession2:AC025706 SequenceContigName2:Contig16 SequenceContigPosition2:2900 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss355820|allelePos=101|len=201|taxid=9606|alleles='C/T'|mol=Genomic
 TTCTTTTACC TATTAAAGCA TTCTTACACC ATACTGTGAA CTGTGTAAAA GGAAGGATCA
 TTGGACATAA TAGATTATCT GACAGGGTGG TCCGGAATGG
 Y
 GGAAGTAAAT CGACAGGTGA GGACACTGAA TTAGCATTCA GACAGTGGGG ACCTCACACC
 TTGTATTCCC TTTTTTGGTA AGATTTTTAT TACCTCCTTA

  Submitted Frequency for ss355820 back to top
There is no frequency submission for ss355820.


  dbSNP summary of Genotypes for ss355820 back to top
No sufficient data to compute Hardy-weinberg probability for ss355820.


  Submitted individual genotype for ss355820 back to top
There is no individual genotype data for ss355820.

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