NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3656518238           
Submitter
HandleEGCUT_WGS
Submitter SNP IDVAR2256486
RefSNP(rs#)clustering in process
Submitted Batch IDE22
Submitted DateAug 28, 2018
Publication Cited[1] Genetic variation in the Estonian population: pharmacogenomics study of adverse drug effects using electronic health records
First entry to dbSNPAug 28 2018 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodPCR_FREE_WGS
Ascertainment Samplesize2240
PopulationEGCUT_WGS
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3656518238|allelePos=26|len=51|taxid=9606|alleles='G/C'|mol=Genomic
 ACTGGGCTCT CGAAACCAAC AGTTT
 S
 ATTAGGAGAA TAAGATCAGA TACAG

  Submitted Frequency for ss3656518238 back to top
There is no frequency submission for ss3656518238.


  dbSNP summary of Genotypes for ss3656518238 back to top
No sufficient data to compute Hardy-weinberg probability for ss3656518238.


  Submitted individual genotype for ss3656518238 back to top
There is no individual genotype data for ss3656518238.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement