NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3943769           
Submitter
HandleSC_JCM
Submitter SNP IDAL356453.4_85630
RefSNP(rs#)rs2786468
Submitted Batch ID21-SEP-2001e
Submitted DateSep 25, 2001
Publication Cited[1] Clone overlap SNPs detected from the public human 19-Mar-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPSep 25 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL356453.4position:85630unfin_quality:99seqversion:AC006384.2position:119910

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3943769|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 GGCTGAGTTC CAAGACGGGA AGAACCAGTC ATCTACTAAT GCTTCATGAC TTGTCAGGTC
 CTGAGCAACT CAGCCTTGTA GTTAAACGTA GTACTTATCA TGAGGGCTTT GATGTTCAAC
 ACAAAATGAA ACTGATGTAT TTAGAAAACA ACAAGCAGGA CAAAATTGCT GAATTGACCC
 AGGAAAAGGA AATTTCTACA
 S
 AGGTCAGTTA ATTCATGACA GTTTTAGAAT GCATTACTGA GAGCTGCTTT GTTTGCTTTG
 ATTTTCTATA GAAAAACAAA ACCAGACAAA TGTGACAAGG TAGAATGCAT GACTCAACAG
 TCTCCTTTAA TTGACCAACC CAGTGGCCCA GACACCCAGG ATAGCCTATT GCTTTCTCAT
 GGACCATTGC TACTAAAAAT

  Submitted Frequency for ss3943769 back to top
There is no frequency submission for ss3943769.


  dbSNP summary of Genotypes for ss3943769 back to top
No sufficient data to compute Hardy-weinberg probability for ss3943769.


  Submitted individual genotype for ss3943769 back to top
There is no individual genotype data for ss3943769.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement