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Submitted SNP(ss) Details: ss4358500           
Submitter
HandleSC_JCM
Submitter SNP IDAF198096.3_57853
RefSNP(rs#)rs1048488
Submitted Batch ID11-FEB-2002
Submitted DateFeb 19, 2002
Publication Cited[1] Clone overlap SNPs detected from the public human 23-Sept-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AF198096.3position:57853unfin_quality:99seqversion:AC000386.1position:33360seqversion:AL669831.2position:50301unfin_quality:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss4358500|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 AGAAAAAGAC TTGCCCATTC TCACCCATGA CCCTGTGCTC AGCAGGTACT AGCAGAGACT
 TCAGGCTCTG TGACTAAAAG GGGTCAGACC AGTTGATATA CCCACAGCTG CCATGTAAGG
 ATGTGTGTGG ACTTCACTAG GGAAGAACGG TGTTATGAAA GAAGGGGCAG AAAAACTCAC
 CTGTTGGTCT CCATGTAGAC
 R
 TTTATTGTCC TGAATTCCTG GAGGTTCAGT GAAAAGCAGA AGATTGTCTT TTACACATGT
 TGAGTTATGC CCCCATATAT GTGGTTGTGG TAAAGAAAGA GGATGTGTTG ATGAGAGGTC
 CTGAAATGCA TTTTCCTAAT ACTCAGCAGG GGCTTCTCAA GAAGGATCTT CCCTAAGAAA
 GAAGCTCAGA GAACAAAAAT

  Submitted Frequency for ss4358500 back to top
There is no frequency submission for ss4358500.


  dbSNP summary of Genotypes for ss4358500 back to top
No sufficient data to compute Hardy-weinberg probability for ss4358500.


  Submitted individual genotype for ss4358500 back to top
There is no individual genotype data for ss4358500.