>gnl|dbSNP|ss43651657|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
CAGTGGGAAT TTGGCTCAGG CTTCTGGGTT TAGCATGGAG ACCCCCTGTT TCATAAGTCT
CCCCAATTCC TCCCTCCAAT CACGGATTCC TACAGCAGGA AGCTCTTGGC TGCCCATAAC
CACAGGTGAG AGGCACCCGT GCCTGGCCCA TGCTTGACAG AAAGCCAGGG AGGTGCATTT
AGCCTCCCTG GGGCACAGAG CTCCTGGGGG TGCCTCAGTG GCCTGCCTTT TCCAAAACTA
AGGGACACAC CCTTCTCTAC TGTGCAGGAG GGAAGCAGCT TGTGGGCACT GTAGCCTAAA
Y
GGGTCTCTTG CCCTGCAGCC TGTAGCCCGG GGCGGGGGTG GGAGGGGAGT GTCCCCGGGA
AGTGATGCTG GCTTGGCCTG TTTTGGGGCA GTCTGTCTCT TGCCCACCTC CCCCATACTG
CCTCCTGCAT GCCAACCATG CCCCTTCCTG CCCCAGGAAG CTGGGCTTCG GTGGCCGGCA
GCACTGAGCA CGTCCCCCCT CTCACCCACC ATAGACAGGA ACAGTGGGCC TGTGGATATG
CATAACGCCT TGGTCAGCCT GTGGTGGGTG GTTTGGCAGG AAGTCAGACC TCAATATGCC
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.90265489
| C=0.09734514 | T/T=0.80530971
C/T=0.19469027
| Pr(chiSq=0.243,df=1)
=0.655 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 84 | 84 | C=0.55952382
| T=0.44047618 | C/T=0.59523809
C/C=0.26190478
T/T=0.14285715
| Pr(chiSq=1.810,df=1)
=0.200 | Genotype
Freq. |
| HapMap-JPT | 170 | 170 | T=0.51176471
| C=0.48823529 | C/T=0.57647061
T/T=0.22352941
C/C=0.20000000
| Pr(chiSq=2.005,df=1)
=0.200 | Genotype
Freq. |
| HapMap-YRI | 224 | 224 | C=0.51785713
| T=0.48214287 | C/T=0.42857143
C/C=0.30357143
T/T=0.26785713
| Pr(chiSq=2.251,df=1)
=0.150 | Genotype
Freq. |
| HAPMAP-ASW | 96 | 96 | C=0.52083331
| T=0.47916666 | C/T=0.54166669
C/C=0.25000000
T/T=0.20833333
| Pr(chiSq=0.349,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | T=0.51219511
| C=0.48780489 | C/T=0.63414633
T/T=0.19512194
C/C=0.17073171
| Pr(chiSq=2.968,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.51764709
| T=0.48235294 | C/T=0.51764709
C/C=0.25882354
T/T=0.22352941
| Pr(chiSq=0.114,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | T=0.67613637
| C=0.32386363 | T/T=0.47727272
C/T=0.39772728
C/C=0.12500000
| Pr(chiSq=0.742,df=1)
=0.403 | Genotype
Freq. |
| HAPMAP-LWK | 176 | 176 | C=0.52272725
| T=0.47727272 | C/T=0.47727272
C/C=0.28409091
T/T=0.23863636
| Pr(chiSq=0.166,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.86000001
| C=0.14000000 | T/T=0.74000001
C/T=0.23999999
C/C=0.02000000
| Pr(chiSq=0.001,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 284 | 284 | T=0.51760566
| C=0.48239437 | C/T=0.45774648
T/T=0.28873238
C/C=0.25352111
| Pr(chiSq=0.987,df=1)
=0.343 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.88636363
| C=0.11363637 | T/T=0.78409094
C/T=0.20454545
C/C=0.01136364
| Pr(chiSq=0.021,df=1)
=1.000 | Genotype
Freq. |
