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Submitted SNP(ss) Details: ss4379448           
Submitter
HandleSC_JCM
Submitter SNP IDAL669831.2_58492
RefSNP(rs#)rs3131972
Submitted Batch ID11-FEB-2002
Submitted DateFeb 19, 2002
Publication Cited[1] Clone overlap SNPs detected from the public human 23-Sept-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL669831.2position:58492unfin_quality:99seqversion:AF198096.3position:66252unfin_quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss4379448|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AGCCGAGACC GCGGCAGGTC CTGACGCAGC ATCAGCCTGA GTCTGAGCCC AGAGGAAGCT
 TCTGCTGCCA CAATTGCTGC GTGTGCTCAT GGCTTGGGTG CAGGCCCAAC CACAGCGGAC
 CAAGGGCAGG CTGAGATTTG GCCTGGACTG GAGGGCTGTC TCAAGGAGGG TGACGTGTCT
 TTGACTTTTG CATTCTTCCC
 Y
 TTTCCTTTCT ATTCTCTTGG TGACGTGAAC ACAGACAGAA AGTGAACGTT Ttttgcataa
 gttccctgta gattctggat attaggcctt tgtcagatgc atagtttgca aatagtttct
 ctcattcagt aggttgtctg tattctctgt caaacgtttc tcttgctgtg cagaagctct
 ttcatttagt taaattcTAC

  Submitted Frequency for ss4379448 back to top
There is no frequency submission for ss4379448.


  dbSNP summary of Genotypes for ss4379448 back to top
No sufficient data to compute Hardy-weinberg probability for ss4379448.


  Submitted individual genotype for ss4379448 back to top
There is no individual genotype data for ss4379448.