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Submitted SNP(ss) Details: ss44032871           
Submitter
HandleABI
Submitter SNP IDhCV25990768
RefSNP(rs#)rs4648345
Submitted Batch IDxplore_hum_chr1_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPJul 18 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44032871|allelePos=301|len=601|taxid=9606|alleles='A/G'|mol=Genomic
 GGAGGACGCA TTCCCTTTCC AGGGTTTCTG TGTGGCTGGT TGCCCTGACC ATCGTACAAT
 GGGTGGAAGA CAGCGCGACT TACTTATCTA GATAGTGCTC ATCCGGGATT CCCAGAGCTT
 CAGCAGGGGC TGCTTTCCCT CCTTGAATGT CTGAAGAGAT TAAAACAATT TAAATAACTT
 TTTATAGAAA TTATTTTCAA AATTTTAGTA AGCAGTTTGA TGTGAGCTCT AAAACGATTA
 TACAAGTAAA AAGGTAGCGT GTTTTCCATT CAGCTGGGAG ACGGCTGAGG TGCAGCAGGC
 R
 TGCAGTGATA CTTGCTGAAT GGACAGAAGC CGTTCCCACA TGGAGCTTCC ATGACATGCA
 TTTACACACC CCGATTCTTT ACACACCCCA GTTCTTTGTG CACCCCAATT CTTTACATAC
 CCTGATTCTT TGGCTTCACA GCATCACTTT CTTTTTCCTA AGACACAAAA ACAGTGAGGT
 CAGGGGCAAA GGGCTGCAGT GTGAGTGAGT GAGAGCCTGT TGAAGATATG TTTTCATCAC
 GAAAGCACAT TTCTGGGTTT TGTTTTAGAA TTTCTACTGG CTGGGCAAGG TGGCTCATGC

  Submitted Frequency for ss44032871 back to top
There is no frequency submission for ss44032871.


  dbSNP summary of Genotypes for ss44032871 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU120120G=0.88333333
A=0.11666667G/G=0.76666665
A/G=0.23333333
Pr(chiSq=0.230,df=1)
=0.655
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090G=0.96666664
A=0.03333334G/G=0.93333334
A/G=0.06666667
Pr(chiSq=0.004,df=1)
=1.000
Genotype
Freq.
HapMap-JPT9090G=0.97777778
A=0.02222222G/G=0.95555556
A/G=0.04444445
Pr(chiSq=0.001,df=1)
=1.000
Genotype
Freq.
HapMap-YRI120120G=0.86666667
A=0.13333334G/G=0.75000000
A/G=0.23333333
A/A=0.01666667
Pr(chiSq=0.006,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss44032871 back to top
There is no individual genotype data for ss44032871.

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