Submitted SNP(ss) Details: ss44035150

Submitted SNP(ss) Details: ss44035150

Submitter
Handle	ABI
Submitter SNP ID	hCV1975029
RefSNP(rs#)	rs2477703
Submitted Batch ID	xplore_hum_chr1_1
Submitted Date	Jul 18, 2005
Publication Cited	N.D.
First entry to dbSNP	Jul 18 2005 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	XPLORE
Ascertainment Samplesize	10
Population	Celera_Donors

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 12
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GAGTCCAGGG GAGAGACAGG GACAAGGTGA GTCTAGCCTT GAACCAGGCA GGGAGGCCGG
 GACAGCCCCT GGTGGTCCCA GAAGGCCTTC CTGGAAGAGG TGGGCTTGAG CCAGGTCTGG
 AGTAAGGCAG ACGGGAGGGG AGGGCAGGGC GGGGACAGGT TGGGGAGCCC CCGTGGCAGC
 CGTTCCCAGT CCACCCTGGG GCAGAGGCAG CTGCCGAGGA GAAGCGGCCT GAAAGTCAGG
 CCCCGGTGGA AACATTCGCT CACACCTGCC TCAGCGTCTC TCATGTGTTG TTTTAAACTC
 R
 TTAAGTTCTG AATCCTTTTT TCCCACCAGT GGTGACTACG TAATAACTGC GTTTGTGTGC
 CTGGAATACT GCTCGGCCAG GCCTGCTTGC GCAACCCTTT TACGAGCATT CCACGGCCCT
 GACCTGTTCC CGCAGTGCGC GGGTATCCCT AATCAGACAC ACGGCTCCAG GTGGGCACTC
 CCTGAGGCGG GTTCTGAGCT GGGGAACCCC AGGAAACCAC TGTGAGCCTT CCTACCGCTG
 TATAAGTAGC AGACACATCC AGGGCTACCC TGCCTGCCCC CCGCCGAACC CAGGGCTGCC

Submitted Frequency for ss44035150

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
AoD_Chinese - EAST ASIA	90	A=0.99000001	G=0.01000000				xplore_hum_chr1_1	ABI

dbSNP summary of Genotypes for ss44035150

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
HapMap-CEU	226	226	A=0.69026548	G=0.30973452	A/A=0.50442475 A/G=0.37168142 G/G=0.12389380	Pr(chiSq=1.932,df=1) =0.200	Genotype Freq.
HapMap-HCB - EAST ASIA	86	86	A=0.97674417	G=0.02325581	A/A=0.95348835 A/G=0.04651163	Pr(chiSq=0.001,df=1) =1.000	Genotype Freq.
HapMap-JPT	172	172	A=0.97674417	G=0.02325581	A/A=0.95348835 A/G=0.04651163	Pr(chiSq=0.002,df=1) =1.000	Genotype Freq.
HapMap-YRI	226	226	A=0.90707964	G=0.09292036	A/A=0.82300884 A/G=0.16814159 G/G=0.00884956	Pr(chiSq=0.001,df=1) =1.000	Genotype Freq.
HAPMAP-ASW	98	98	A=0.86734694	G=0.13265306	A/A=0.75510204 A/G=0.22448979 G/G=0.02040816	Pr(chiSq=0.029,df=1) =1.000	Genotype Freq.
HAPMAP-CHD	170	170	A=0.95294118	G=0.04705882	A/A=0.90588236 A/G=0.09411765	Pr(chiSq=0.019,df=1) =1.000	Genotype Freq.
HAPMAP-GIH	176	176	A=0.73295456	G=0.26704547	A/A=0.55681819 A/G=0.35227272 G/G=0.09090909	Pr(chiSq=0.882,df=1) =0.371	Genotype Freq.
HAPMAP-LWK	180	180	A=0.82777780	G=0.17222223	A/A=0.68888891 A/G=0.27777779 G/G=0.03333334	Pr(chiSq=0.060,df=1) =1.000	Genotype Freq.
HAPMAP-MEX	100	100	A=0.72000003	G=0.28000000	A/G=0.47999999 A/A=0.47999999 G/G=0.04000000	Pr(chiSq=1.814,df=1) =0.200	Genotype Freq.
HAPMAP-MKK	286	286	A=0.76573426	G=0.23426573	A/A=0.55944055 A/G=0.41258740 G/G=0.02797203	Pr(chiSq=3.218,df=1) =0.100	Genotype Freq.
HAPMAP-TSI	176	176	A=0.71022725	G=0.28977272	A/A=0.48863637 A/G=0.44318181 G/G=0.06818182	Pr(chiSq=0.518,df=1) =0.479	Genotype Freq.

Submitted individual genotype for ss44035150

There is no individual genotype data for ss44035150.

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