Population ID -Class | Total Sample (2N) | Founder (2N) | Major Allele Freq. | Minor Allele Freq. | Genotype Freq. | HWE Goodness of Fit | Data Source | HapMap-CEU | 226 | 226 | G=0.51769912
| T=0.48230088 | G/T=0.57522124 G/G=0.23008850 T/T=0.19469027
| Pr(chiSq=2.607,df=1) =0.150 | Genotype Freq. |
HapMap-HCB - EAST ASIA | 86 | 86 | T=0.93023258
| G=0.06976745 | T/T=0.86046511 G/T=0.13953489
| Pr(chiSq=0.033,df=1) =1.000 | Genotype Freq. |
HapMap-JPT | 172 | 172 | T=0.97093022
| G=0.02906977 | T/T=0.94186044 G/T=0.05813954
| Pr(chiSq=0.004,df=1) =1.000 | Genotype Freq. |
HapMap-YRI | 226 | 282 | T=0.92035401
| G=0.07964602 | T/T=0.84397161 G/T=0.14893617 G/G=0.00709220
| Pr(chiSq=0.019,df=1) =1.000 | Genotype Freq. |
HAPMAP-ASW | 98 | 106 | T=0.79591835
| G=0.20408164 | T/T=0.64150941 G/T=0.30188680 G/G=0.05660377
| Pr(chiSq=0.376,df=1) =0.584 | Genotype Freq. |
HAPMAP-CHB | 82 | 82 | T=0.92682928
| G=0.07317073 | T/T=0.85365856 G/T=0.14634146
| Pr(chiSq=0.036,df=1) =1.000 | Genotype Freq. |
HAPMAP-CHD | 170 | 170 | T=0.95294118
| G=0.04705882 | T/T=0.90588236 G/T=0.09411765
| Pr(chiSq=0.019,df=1) =1.000 | Genotype Freq. |
HAPMAP-GIH | 176 | 176 | T=0.69886363
| G=0.30113637 | T/T=0.48863637 G/T=0.42045453 G/G=0.09090909
| Pr(chiSq=0.000,df=1) =1.000 | Genotype Freq. |
HAPMAP-LWK | 180 | 180 | T=0.97777778
| G=0.02222222 | T/T=0.95555556 G/T=0.04444445
| Pr(chiSq=0.002,df=1) =1.000 | Genotype Freq. |
HAPMAP-MEX | 100 | 154 | T=0.74000001
| G=0.25999999 | T/T=0.57142860 G/T=0.35064936 G/G=0.07792208
| Pr(chiSq=0.435,df=1) =0.527 | Genotype Freq. |
HAPMAP-MKK | 286 | 286 | T=0.89860141
| G=0.10139860 | T/T=0.80419582 G/T=0.18881118 G/G=0.00699301
| Pr(chiSq=0.186,df=1) =0.752 | Genotype Freq. |
HAPMAP-TSI | 176 | 176 | T=0.59090906
| G=0.40909091 | G/T=0.45454547 T/T=0.36363637 G/G=0.18181819
| Pr(chiSq=0.315,df=1) =0.584 | Genotype Freq. |
AX-AM - EAST ASIA | 20 | 20 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.003,df=1) =1.000 | Genotype Freq. |
CEU - EUROPE | 120 | 120 | G=0.50833333
| T=0.49166667 | G/T=0.58333331 G/G=0.21666667 T/T=0.20000000
| Pr(chiSq=1.673,df=1) =0.200 | Genotype Freq. |
CHB - EAST ASIA | 90 | 90 | T=0.93333334
| G=0.06666667 | T/T=0.86666667 G/T=0.13333334
| Pr(chiSq=0.030,df=1) =1.000 | Genotype Freq. |
CN-CC - EAST ASIA | 46 | 46 | T=0.95652175
| G=0.04347826 | T/T=0.91304350 G/T=0.08695652
| Pr(chiSq=0.004,df=1) =1.000 | Genotype Freq. |
CN-GA - EAST ASIA | 60 | 60 | T=0.89999998
| G=0.10000000 | T/T=0.80000001 G/T=0.20000000
| Pr(chiSq=0.070,df=1) =1.000 | Genotype Freq. |
CN-HM - EAST ASIA | 46 | 46 | T=0.89130437
| G=0.10869565 | T/T=0.78260869 G/T=0.21739130
| Pr(chiSq=0.070,df=1) =1.000 | Genotype Freq. |
CN-JI - EAST ASIA | 62 | 62 | T=0.95161289
| G=0.04838710 | T/T=0.90322578 G/T=0.09677419
| Pr(chiSq=0.008,df=1) =1.000 | Genotype Freq. |
CN-JN - EAST ASIA | 56 | 56 | T=0.96428573
| G=0.03571429 | T/T=0.92857140 G/T=0.07142857
| Pr(chiSq=0.003,df=1) =1.000 | Genotype Freq. |
CN-SH - EAST ASIA | 28 | 28 | T=0.53571427
| G=0.46428570 | G/T=0.78571427 T/T=0.14285715 G/G=0.07142857
| Pr(chiSq=4.701,df=1) =0.050 | Genotype Freq. |
CN-UG - EAST ASIA | 50 | 50 | T=0.81999999
| G=0.18000001 | T/T=0.68000001 G/T=0.28000000 G/G=0.04000000
| Pr(chiSq=0.066,df=1) =1.000 | Genotype Freq. |
CN-WA - EAST ASIA | 102 | 102 | T=0.87254900
| G=0.12745099 | T/T=0.74509805 G/T=0.25490198
| Pr(chiSq=0.260,df=1) =0.655 | Genotype Freq. |
ID-AL - PACIFIC | 38 | 38 | T=0.97368419
| G=0.02631579 | T/T=0.94736844 G/T=0.05263158
| Pr(chiSq=0.001,df=1) =1.000 | Genotype Freq. |
ID-JA - PACIFIC | 68 | 68 | T=0.92647058
| G=0.07352941 | T/T=0.85294116 G/T=0.14705883
| Pr(chiSq=0.030,df=1) =1.000 | Genotype Freq. |
ID-JV - PACIFIC | 38 | 38 | T=0.89473683
| G=0.10526316 | T/T=0.78947371 G/T=0.21052632
| Pr(chiSq=0.052,df=1) =1.000 | Genotype Freq. |
ID-KR - PACIFIC | 34 | 34 | T=0.85294116
| G=0.14705883 | T/T=0.70588237 G/T=0.29411766
| Pr(chiSq=0.138,df=1) =0.752 | Genotype Freq. |
ID-LA - PACIFIC | 40 | 40 | T=0.87500000
| G=0.12500000 | T/T=0.80000001 G/T=0.15000001 G/G=0.05000000
| Pr(chiSq=1.976,df=1) =0.200 | Genotype Freq. |
ID-MT - PACIFIC | 30 | 30 | T=0.89999998
| G=0.10000000 | T/T=0.80000001 G/T=0.20000000
| Pr(chiSq=0.035,df=1) =1.000 | Genotype Freq. |
ID-RA - PACIFIC | 28 | 28 | T=0.92857140
| G=0.07142857 | T/T=0.85714287 G/T=0.14285715
| Pr(chiSq=0.011,df=1) =1.000 | Genotype Freq. |
ID-SB - PACIFIC | 40 | 40 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.005,df=1) =1.000 | Genotype Freq. |
ID-SO - PACIFIC | 38 | 38 | T=0.78947371
| G=0.21052632 | T/T=0.63157892 G/T=0.31578946 G/G=0.05263158
| Pr(chiSq=0.047,df=1) =1.000 | Genotype Freq. |
ID-SU - PACIFIC | 50 | 50 | T=0.94000000
| G=0.06000000 | T/T=0.88000000 G/T=0.12000000
| Pr(chiSq=0.012,df=1) =1.000 | Genotype Freq. |
ID-TB - PACIFIC | 40 | 40 | T=0.89999998
| G=0.10000000 | T/T=0.80000001 G/T=0.20000000
| Pr(chiSq=0.047,df=1) =1.000 | Genotype Freq. |
ID-TR - PACIFIC | 40 | 40 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.005,df=1) =1.000 | Genotype Freq. |
IN-DR - CENTRAL ASIA | 48 | 48 | T=0.70833331
| G=0.29166666 | T/T=0.50000000 G/T=0.41666666 G/G=0.08333334
| Pr(chiSq=0.002,df=1) =1.000 | Genotype Freq. |
IN-EL - CENTRAL ASIA | 28 | 28 | T=0.78571427
| G=0.21428572 | T/T=0.57142860 G/T=0.42857143
| Pr(chiSq=0.398,df=1) =0.584 | Genotype Freq. |
IN-IL - CENTRAL ASIA | 28 | 28 | T=0.78571427
| G=0.21428572 | T/T=0.71428573 G/T=0.14285715 G/G=0.14285715
| Pr(chiSq=4.641,df=1) =0.050 | Genotype Freq. |
IN-NI - CENTRAL ASIA | 40 | 40 | T=0.89999998
| G=0.10000000 | T/T=0.80000001 G/T=0.20000000
| Pr(chiSq=0.047,df=1) =1.000 | Genotype Freq. |
IN-NL - CENTRAL ASIA | 26 | 26 | T=0.76923078
| G=0.23076923 | T/T=0.53846157 G/T=0.46153846
| Pr(chiSq=0.478,df=1) =0.527 | Genotype Freq. |
IN-SP - CENTRAL ASIA | 42 | 42 | T=0.73809522
| G=0.26190478 | T/T=0.61904764 G/T=0.23809524 G/G=0.14285715
| Pr(chiSq=3.099,df=1) =0.100 | Genotype Freq. |
IN-TB - CENTRAL ASIA | 46 | 46 | T=0.89130437
| G=0.10869565 | T/T=0.82608694 G/T=0.13043478 G/G=0.04347826
| Pr(chiSq=2.457,df=1) =0.150 | Genotype Freq. |
IN-WI - CENTRAL ASIA | 50 | 50 | T=0.80000001
| G=0.20000000 | T/T=0.63999999 G/T=0.31999999 G/G=0.04000000
| Pr(chiSq=0.000,df=1) =1.000 | Genotype Freq. |
IN-WL - CENTRAL ASIA | 28 | 28 | T=0.57142860
| G=0.42857143 | G/T=0.57142860 T/T=0.28571430 G/G=0.14285715
| Pr(chiSq=0.389,df=1) =0.584 | Genotype Freq. |
JP-ML - EAST ASIA | 140 | 140 | T=0.94999999
| G=0.05000000 | T/T=0.91428572 G/T=0.07142857 G/G=0.01428571
| Pr(chiSq=4.309,df=1) =0.050 | Genotype Freq. |
JP-RK - EAST ASIA | 98 | 98 | T=0.87755102
| G=0.12244898 | T/T=0.77551019 G/T=0.20408164 G/G=0.02040816
| Pr(chiSq=0.124,df=1) =0.752 | Genotype Freq. |
JPT - EAST ASIA | 88 | 88 | T=0.96590906
| G=0.03409091 | T/T=0.93181819 G/T=0.06818182
| Pr(chiSq=0.004,df=1) =1.000 | Genotype Freq. |
KR-KR - EAST ASIA | 130 | 130 | T=0.96153843
| G=0.03846154 | T/T=0.93846154 G/T=0.04615385 G/G=0.01538462
| Pr(chiSq=9.189,df=1) =0.003 | Genotype Freq. |
MY-BD - PACIFIC | 100 | 100 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.014,df=1) =1.000 | Genotype Freq. |
MY-JH - PACIFIC | 100 | 100 | T=0.75999999
| G=0.23999999 | T/T=0.57999998 G/T=0.36000001 G/G=0.06000000
| Pr(chiSq=0.009,df=1) =1.000 | Genotype Freq. |
MY-KN - PACIFIC | 30 | 30 | T=0.73333335
| G=0.26666668 | T/T=0.53333336 G/T=0.40000001 G/G=0.06666667
| Pr(chiSq=0.008,df=1) =1.000 | Genotype Freq. |
MY-KS - PACIFIC | 60 | 60 | T=0.76666665
| G=0.23333333 | T/T=0.60000002 G/T=0.33333334 G/G=0.06666667
| Pr(chiSq=0.140,df=1) =0.752 | Genotype Freq. |
MY-MN - PACIFIC | 40 | 40 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.005,df=1) =1.000 | Genotype Freq. |
MY-TM - PACIFIC | 96 | 96 | T=0.92708331
| G=0.07291666 | T/T=0.85416669 G/T=0.14583333
| Pr(chiSq=0.042,df=1) =1.000 | Genotype Freq. |
PI-MW - PACIFIC | 36 | 36 | T=0.94444442
| G=0.05555556 | T/T=0.88888890 G/T=0.11111111
| Pr(chiSq=0.007,df=1) =1.000 | Genotype Freq. |
PI-UB - PACIFIC | 40 | 40 | T=0.92500001
| G=0.07500000 | T/T=0.85000002 G/T=0.15000001
| Pr(chiSq=0.019,df=1) =1.000 | Genotype Freq. |
PI-UI - PACIFIC | 40 | 40 | T=0.92500001
| G=0.07500000 | T/T=0.85000002 G/T=0.15000001
| Pr(chiSq=0.019,df=1) =1.000 | Genotype Freq. |
PI-UN - PACIFIC | 38 | 38 | T=0.92105263
| G=0.07894737 | T/T=0.84210527 G/T=0.15789473
| Pr(chiSq=0.021,df=1) =1.000 | Genotype Freq. |
SG-CH - PACIFIC | 60 | 60 | T=0.89999998
| G=0.10000000 | T/T=0.80000001 G/T=0.20000000
| Pr(chiSq=0.070,df=1) =1.000 | Genotype Freq. |
SG-ID - PACIFIC | 60 | 60 | T=0.81666666
| G=0.18333334 | T/T=0.66666669 G/T=0.30000001 G/G=0.03333334
| Pr(chiSq=0.000,df=1) =1.000 | Genotype Freq. |
SG-ML - PACIFIC | 60 | 60 | T=0.96666664
| G=0.03333334 | T/T=0.96666664 G/G=0.03333334
| Pr(chiSq=28.067,df=1) =0.001 | Genotype Freq. |
TH-HM - PACIFIC | 40 | 40 | T=0.92500001
| G=0.07500000 | T/T=0.85000002 G/T=0.15000001
| Pr(chiSq=0.019,df=1) =1.000 | Genotype Freq. |
TH-KA - PACIFIC | 38 | 38 | T=0.89473683
| G=0.10526316 | T/T=0.78947371 G/T=0.21052632
| Pr(chiSq=0.052,df=1) =1.000 | Genotype Freq. |
TH-LW - PACIFIC | 38 | 38 | T=0.92105263
| G=0.07894737 | T/T=0.84210527 G/T=0.15789473
| Pr(chiSq=0.021,df=1) =1.000 | Genotype Freq. |
TH-MO - PACIFIC | 38 | 38 | T=0.84210527
| G=0.15789473 | T/T=0.73684210 G/T=0.21052632 G/G=0.05263158
| Pr(chiSq=0.825,df=1) =0.371 | Genotype Freq. |
TH-PL - PACIFIC | 36 | 36 | T=0.72222221
| G=0.27777779 | T/T=0.50000000 G/T=0.44444445 G/G=0.05555556
| Pr(chiSq=0.209,df=1) =0.655 | Genotype Freq. |
TH-PP - PACIFIC | 36 | 36 | T=0.94444442
| G=0.05555556 | T/T=0.88888890 G/T=0.11111111
| Pr(chiSq=0.007,df=1) =1.000 | Genotype Freq. |
TH-TK - PACIFIC | 36 | 36 | T=0.86111110
| G=0.13888890 | T/T=0.72222221 G/T=0.27777779
| Pr(chiSq=0.121,df=1) =0.752 | Genotype Freq. |
TH-TL - PACIFIC | 40 | 40 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.005,df=1) =1.000 | Genotype Freq. |
TH-TN - PACIFIC | 36 | 36 | T=0.86111110
| G=0.13888890 | T/T=0.72222221 G/T=0.27777779
| Pr(chiSq=0.121,df=1) =0.752 | Genotype Freq. |
TH-TU - PACIFIC | 40 | 40 | T=0.94999999
| G=0.05000000 | T/T=0.89999998 G/T=0.10000000
| Pr(chiSq=0.005,df=1) =1.000 | Genotype Freq. |
TH-TY - PACIFIC | 36 | 36 | T=0.83333331
| G=0.16666667 | T/T=0.66666669 G/T=0.33333334
| Pr(chiSq=0.220,df=1) =0.655 | Genotype Freq. |
TH-YA - PACIFIC | 36 | 36 | T=0.88888890
| G=0.11111111 | T/T=0.77777779 G/T=0.22222222
| Pr(chiSq=0.059,df=1) =1.000 | Genotype Freq. |
TW-HA - EAST ASIA | 92 | 92 | T=0.94565219
| G=0.05434782 | T/T=0.89130437 G/T=0.10869565
| Pr(chiSq=0.016,df=1) =1.000 | Genotype Freq. |
TW-HB - EAST ASIA | 64 | 64 | T=0.92187500
| G=0.07812500 | T/T=0.84375000 G/T=0.15625000
| Pr(chiSq=0.035,df=1) =1.000 | Genotype Freq. |
YRI - WEST AFRICA | 120 | 120 | T=0.89166665
| G=0.10833333 | T/T=0.80000001 G/T=0.18333334 G/G=0.01666667
| Pr(chiSq=0.156,df=1) =0.752 | Genotype Freq. |