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Submitted SNP(ss) Details: ss44123871           
Submitter
HandleABI
Submitter SNP IDhCV935704
RefSNP(rs#)rs522496
Submitted Batch IDxplore_hum_chr1_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPJul 18 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 2
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44123871|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 ACCTCCACAC CCCTCTGTTC TCACCACGCA GGCCCTAAGG CGGCATTGAA TGCAGTCTGG
 AGTCAAGAAC TCAAGTTCAA ATCCTGGCTC AGACTCTTTG CTGTGTGACC TTGGGCAAGT
 CCTGGCATCT CTTTGAGCTT CAGCTTTCTC AGGACCAAAC CCACGGTGAA GGTACGGTGA
 TATCGCGTTG GACCCCAGCG GCAGCCCTGC CCTTCCCGCT GGGCCCCACC TGCCTGTCCC
 TTCTCCATGT TCCCACCCGC TTGGGTCTCA CCTCCCGGAT CAGCTGCTTC TCGGCCTCCA
 Y
 GTCATGCTGG ATCACAGGTT GGGGCAACAG CTTCTCCTCC ACCTGCACAG GGTCTGGGGG
 CACCTGCCTG GACAGCAGGG CTGGGGGAGA AACAGAAATT AGCAGCCAGG ATGAGGGGCA
 CATTGTGTGC AGGAACTAAG CAGAAATCTA TAAAAAGACG ACCTCATGGT CATTCAAGAA
 GACTTTAAAG TATTCAGCTT ATTTCAAACA CATCTCCATG TAAAAGGCTG TTAGTCATCC
 AACAAATATT TATGGAGCAC CTCGATGTTC CAGACTCTGA GGATGCGGCA TTGAACAAAG

  Submitted Frequency for ss44123871 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AoD_African_American
NORTH AMERICA
90T=0.50999999
C=0.49000001
xplore_hum_chr1_1ABI
AoD_Caucasian
NORTH AMERICA
92T=0.63000000
C=0.37000000
xplore_hum_chr1_1ABI


  dbSNP summary of Genotypes for ss44123871 back to top
No sufficient data to compute Hardy-weinberg probability for ss44123871.


  Submitted individual genotype for ss44123871 back to top
There is no individual genotype data for ss44123871.

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