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Submitted SNP(ss) Details: ss44132820           
Submitter
HandleABI
Submitter SNP IDhCV15949664
RefSNP(rs#)rs2072660
Submitted Batch IDxplore_hum_chr1_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPJul 18 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 2
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44132820|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 TCTCCATGCT CTTTCACCCT GCCACCCTCT GCTGCACAGT AGTGTTGGGT GGAGGATGGA
 CGAGTGAGCT ACCAGGAAGA GGGGCGCTGC CCCCACAGAT CCATCCTTTT GCTTCATCTG
 GAGTCCCTCC TCCCCCACGC CTCCATCCAC ACACAGCAGC TCCAACCTGG AGGCTGGACC
 AACTGCTTTG TTTTGGCTGC TCTCCATCTC TTGTACCAGC CCAGGCAATA GTGTTGAGGA
 GGGGAGCAAG GCTGCTAAGT GGAAGACAGA GATGGCAGAG CCATCCACCC TGAGGAGTGA
 Y
 GGGCAAGGGG CCAGGAAGGG GACAGGATTG TCTGCTGCCT CCAAGTCATG GGAGAAGAGG
 GGTATAGGAC AAGGGGTGGA AGGGCAGGAG CTCACACCGC ACCGGGCTGG CCTGACACAA
 TGGTAGCTCT GAAGGGAGGG GAAGAGAGAG GCCTGGGTGT GACCTGACAC CTGCCGCTGC
 TTGAGTGGAC AGCAGCTGGA CTGGGTGGGC CCCACAGTGG TCAGCGATTC CTGCCAAGTA
 GGGTTTAGCC GGGCCCCATG GTCACAGACC CCTGGGGGAG GCTTCCAGCT CAGTCCCACA

  Submitted Frequency for ss44132820 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AoD_Chinese
EAST ASIA
90C=0.63000000
T=0.37000000
xplore_hum_chr1_1ABI
AoD_Japanese
EAST ASIA
90C=0.63000000
T=0.37000000
xplore_hum_chr1_1ABI


  dbSNP summary of Genotypes for ss44132820 back to top
No sufficient data to compute Hardy-weinberg probability for ss44132820.


  Submitted individual genotype for ss44132820 back to top
There is no individual genotype data for ss44132820.

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