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Submitted SNP(ss) Details: ss44577109           
Submitter
HandleABI
Submitter SNP IDhCV2688467
RefSNP(rs#)rs1229984
Submitted Batch IDxplore_hum_chr4_1
Submitted DateJul 19, 2005
Publication CitedN.D.
First entry to dbSNPJul 19 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 3
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44577109|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 GAGTGCCTGA ATGCATACAT GCTTGGGTCA GGCAGGCAGA GAGGGAAAGA GGAAACTCCT
 GAAGTCCTGG CTGCGCGGTG ACCTTGTGCA AGCCCTTTCG TCTCTCATTG CCTTGGTTTC
 CTTATCCAGG CTGGGAAATC CTGGATGGTG AACCACACGT GTTCCCTGAG TGTGAATCCT
 GTACCTGGTT TGACTGTAGT CACCCCTTCT CCAACACTCT CCACGATGCC GGCTGCCTCA
 TGGCCTAAAA TCACAGGAAG GGGGGTCACC AGGTTGCCAC TAACCACGTG GTCATCTGTG
 Y
 GACAGATTCC TACAGCCACC ATCTACAGAA TAAAGAGAAG CTGTTCAGAT TCAGAAAAGA
 TTGTAACTAG ATGAATTTAA CATACCCAAA TTCCTGAAAT TGTGTTTCTA AAATGTATTT
 GAGGGTTTTG CTACTAATCC CTACTATTCC TAAATATGAA AGATTCAGTT TATCCCCAAG
 GTTATTCAGT CTAAAGCCCT TCTCTACCTT CCCTTCTTGA ATTAAACAAT TTAGAATAAT
 CTGTGAAATA ATTGATTCTG AAATATTTAA GTCTTATGTA AGAATGCACG CTTTAAAAAA

  Submitted Frequency for ss44577109 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
AoD_Chinese
- EAST ASIA 		90T=0.69000000
C=0.31000000
xplore_hum_chr4_1ABI
AoD_Japanese
- EAST ASIA 		90T=0.86000001
C=0.14000000
xplore_hum_chr4_1ABI
AoD_Caucasian
- NORTH AMERICA 		92C=0.94000000
T=0.06000000
xplore_hum_chr4_1ABI


  dbSNP summary of Genotypes for ss44577109 back to top
No sufficient data to compute Hardy-weinberg probability for ss44577109.


  Submitted individual genotype for ss44577109 back to top
There is no individual genotype data for ss44577109.

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