Submitted SNP(ss) Details: ss44832983

Submitted SNP(ss) Details: ss44832983

Submitter
Handle	ABI
Submitter SNP ID	hCV2568924
RefSNP(rs#)	rs71
Submitted Batch ID	xplore_hum_chr7_1
Submitted Date	Jul 19, 2005
Publication Cited	N.D.
First entry to dbSNP	Jul 19 2005 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	XPLORE
Ascertainment Samplesize	10
Population	Celera_Donors

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 2
Genotype Summary	population count: 13
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 AGAGTCAGGA AAATTTTCTA AGGAAATGGT TGTGGGGGTT AGAGAGAGAA GAATCAAGTA
 TGGCTCCAAA GATTTTGGTC TAAGCAAGCA ATATCTGGCT CTTGGTTGTC ATCACATCGT
 TTCCCCTTGT TCTAGAACCC CTAGACCATG ATAAGTCTAT TTTCTCACAC TGCTTTTTAG
 TTGATCAGAG TCCTTTGCTA CATACAAAAT TGCAAGTGAC AGCAATCACC CCAATTCCTC
 CTCCTTGTAC CTCCGTTCCT GCCTTGCTTC ACTCCACCTA CAACGAATCC ACCTGTTCCT
 R
 CAGTTGCCAA CTGAATTGGC AGGTCTGAAT TAAACTGCTG GGTTTGACAT TTAAAAAATG
 GAGTTTTCAG TACTTCTGGG TTCTCCTTTT ATTAGGCTAA GCATGAAGGC TGCTAATATT
 CACCCCACTC ATCGCAAGAC ACATGATATC TATGACAAGG CTCCTTAAAA AAATAGCAGT
 AAGGCTTCTG GGATTACTTA AACTACTGCA TGTGTTTCTT AAAAACAAAT ACGAAAGGTC
 AAATGTTGCT GAGTGTCAAC ATTGCCCACA GAAAAATATC ATTATGCAGC TTTCTGGAAT

Submitted Frequency for ss44832983

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
AoD_African_American - NORTH AMERICA	90	G=0.88000000	A=0.12000000				xplore_hum_chr7_1	ABI
AoD_Caucasian - NORTH AMERICA	92	G=0.75000000	A=0.25000000				xplore_hum_chr7_1	ABI

dbSNP summary of Genotypes for ss44832983

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
HapMap-CEU	226	226	G=0.75221241	A=0.24778761	G/G=0.58407080 A/G=0.33628318 A/A=0.07964602	Pr(chiSq=1.083,df=1) =0.317	Genotype Freq.
HapMap-HCB - EAST ASIA	84	84	G=0.84523809	A=0.15476191	G/G=0.71428573 A/G=0.26190478 A/A=0.02380952	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.
HapMap-JPT	172	172	G=0.69767439	A=0.30232558	G/G=0.52325583 A/G=0.34883720 A/A=0.12790698	Pr(chiSq=2.576,df=1) =0.150	Genotype Freq.
HapMap-YRI	226	226	G=0.89823008	A=0.10176991	G/G=0.80530971 A/G=0.18584071 A/A=0.00884956	Pr(chiSq=0.031,df=1) =1.000	Genotype Freq.
HAPMAP-ASW	98	98	G=0.90816325	A=0.09183674	G/G=0.81632656 A/G=0.18367347	Pr(chiSq=0.088,df=1) =1.000	Genotype Freq.
HAPMAP-CHB	82	82	G=0.86585367	A=0.13414635	G/G=0.73170733 A/G=0.26829270	Pr(chiSq=0.246,df=1) =0.655	Genotype Freq.
HAPMAP-CHD	166	166	G=0.78915662	A=0.21084337	G/G=0.60240966 A/G=0.37349397 A/A=0.02409638	Pr(chiSq=1.243,df=1) =0.273	Genotype Freq.
HAPMAP-GIH	174	174	G=0.81609195	A=0.18390805	G/G=0.64367819 A/G=0.34482759 A/A=0.01149425	Pr(chiSq=1.925,df=1) =0.200	Genotype Freq.
HAPMAP-LWK	172	172	G=0.88372093	A=0.11627907	G/G=0.77906978 A/G=0.20930232 A/A=0.01162791	Pr(chiSq=0.029,df=1) =1.000	Genotype Freq.
HAPMAP-MEX	96	96	A=0.52083331	G=0.47916666	A/G=0.50000000 A/A=0.27083334 G/G=0.22916667	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.
HAPMAP-MKK	286	286	G=0.85664338	A=0.14335664	G/G=0.72027969 A/G=0.27272728 A/A=0.00699301	Pr(chiSq=1.743,df=1) =0.200	Genotype Freq.

Submitted individual genotype for ss44832983

There is no individual genotype data for ss44832983.

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