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Submitted SNP(ss) Details: ss453353           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-383328
RefSNP(rs#)rs357116
Submitted Batch IDOVLP-000621-1
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:hmwz SequenceAccession1:AC021024 SequenceContigName1:Contig15 SequenceContigPosition1:2703 SequenceLocalName2:AC017001 SequenceAccession2:AC017001 SequenceContigName2:Contig14 SequenceContigPosition2:13588 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss453353|allelePos=101|len=201|taxid=9606|alleles='T/C'|mol=Genomic
 TGCTCACATG CGTGGGGTTC TGGGCCCCCC CGGGGCTGCT CAGCAAACCA TGGATTGGAT
 GTATCCCACT GCCCATCTGC AGAGCAAGGT GATTTATGCC
 Y
 AAGGAACATG GGATAACCAA TCCCCTTGAG GACTTTTATT AAGCACCTGC TGTATGCAGA
 CTCATTATCA ATGTGCTTGG AAACATAAGA GGAAGAATGG

  Submitted Frequency for ss453353 back to top
There is no frequency submission for ss453353.


  dbSNP summary of Genotypes for ss453353 back to top
No sufficient data to compute Hardy-weinberg probability for ss453353.


  Submitted individual genotype for ss453353 back to top
There is no individual genotype data for ss453353.