NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss453832860           
Submitter
Handle1000GENOMES
Submitter SNP ID20101123_snps_90_chr1_120717
RefSNP(rs#)rs190208468
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPJul 20 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize2188
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss453832860|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 TGACACACAC TTTACAGTAC AGAAGAAAAT GTCTCCGGCA ATAAATCACA AAGTTAAAAT
 TACCTAGTCT ACAATTAACT ACACAGTGAT GGTAAATCAT TTTCTACCAA AAGAAAGAAA
 TGTCTTGTCT ATTCAGGTTC TGCTCTACTT AAAAGTTTTC CTTGTTGGCG AGCAAGTGGT
 TAGAAAATTA TATTTTATAC
 R
 TACATTCAGC TTAACTATCA TTCAGCTCAG GAAGATGACT CAGGGCCTTA TCCATACCTT
 CAAGTTTGCT CTTAGCAAGT AATTGTTTCA GTATCTATAT CAAAAATGGC TTAAGCCTGC
 AACATGTTTC TGAATGATTA ACAAGGTGAT AGTCAGTTCT TCATTGAATC CTGGATGCTT
 TATTTTTCTT AATAAGAGGA

  Submitted Frequency for ss453832860 back to top
There is no frequency submission for ss453832860.


  dbSNP summary of Genotypes for ss453832860 back to top
No sufficient data to compute Hardy-weinberg probability for ss453832860.


  Submitted individual genotype for ss453832860 back to top
There is no individual genotype data for ss453832860.