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Submitted SNP(ss) Details: ss453905588           
Submitter
Handle1000GENOMES
Submitter SNP ID20101123_snps_72818_chr1_17913964
RefSNP(rs#)rs116209107
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPJul 20 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize2188
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss453905588|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CCTAACCCAA CCCCCTCCCC CCGGCCTTAC CAGCACTGTA GGGCCATGTG GCTTGAGTTT
 GATGGCTCTC ATTCCCTGGC TCAGACCTGA GGTGCTCACC CAGTTCCAGC CATGCCCACC
 TACCCCAGCC ATCTCTCCAT TGACCAAACC TCGGAGATCC TGCAGCCTGG CCAACTCCTT
 CTCTCTTCCA GGAGATCAGC
 Y
 GGTTCCAGGA GTCCCAGGCC CCTCCTCTGA GGCAGAGGAC GACCCAGGAG AGGCGTTTGA
 GTTTGATGAC AGTGATGATG AAGAGGACAC CAGCGCAGCC CTGGGCGTCC CCAGCCTTGC
 TCCTGAGAGG GACACAGACC CCCCACTGAT CCACTTGGAC TCCATCCCTG TCACTGGTAA
 GATGTTTCTG GGAACTTCCG

  Submitted Frequency for ss453905588 back to top
There is no frequency submission for ss453905588.


  dbSNP summary of Genotypes for ss453905588 back to top
No sufficient data to compute Hardy-weinberg probability for ss453905588.


  Submitted individual genotype for ss453905588 back to top
There is no individual genotype data for ss453905588.

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