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Submitted SNP(ss) Details: ss453906642           
Submitter
Handle1000GENOMES
Submitter SNP ID20101123_snps_73872_chr1_18149613
RefSNP(rs#)rs55738309
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPJul 20 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize2188
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss453906642|allelePos=201|len=401|taxid=9606|alleles='C/A'|mol=Genomic
 AGAGGGGGAA GCTGCTTATG GTGGCCTAGG CTGCCTGCAC AACTAACCCC ATCCTTTGCT
 TCCGCAGGTC CCACCCACCT CTGCCTCCGC CATGGCTGCA AGAACCGTTA TCATTGACCA
 CGGGTCTGGC TTTTTGAAGG CTGGCACGGC CGGCTGGAAT GAGCCTCAGA TGGTCTTCCC
 GAACATCGTG AACTACCTAC
 M
 GTGCAAGGAG AACCCTGGCC CCAGCTATGC CCGTAGGCGT GTGAGCCTGG GCATCGACAT
 TTGCCATCCT GACACCTTTA GCTACCCCAT CGAGCGGGGC CGCATCCTCA ACTGGGAGGG
 TGTGCAGTAC CTCTGGTCAT TTGTGTTGGA GAACCACAGA CGGGAGCAAG AGGTCCCCCC
 TGTGATCATC ACGGAGACAC

  Submitted Frequency for ss453906642 back to top
There is no frequency submission for ss453906642.


  dbSNP summary of Genotypes for ss453906642 back to top
No sufficient data to compute Hardy-weinberg probability for ss453906642.


  Submitted individual genotype for ss453906642 back to top
There is no individual genotype data for ss453906642.