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Submitted SNP(ss) Details: ss46525719           
Submitter
HandleBROAD
Submitter SNP IDmt11467
RefSNP(rs#)rs2853493
Submitted Batch IDHapMap-SNP-2004-08-20
Submitted DateApr 25, 2005
Publication Cited[1] The International HapMap Project
First entry to dbSNPApr 25 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBROAD_ENCODE_PCR_RESEQ-2004-08-32C
Ascertainment Samplesize32
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss46525719|allelePos=499|len=787|taxid=9606|alleles='A/G'|mol=Genomic
 CTGACTCCTN CCCCTCACAA TCATGGCAAG CCAACGCCAC TTATCCAGTG AACCACTATC
 ACGAAAAAAA CTCTACCTCT CTATACTAAT CTCCCTACAA ATCTCCTTAA TTATAACATT
 CACAGCCACA GAACTAATCA TATTTTATAT CTTCTTCGAA ACCACACTTA TCCCCACCTT
 GGCTATCATC ACCCGATGAG GCAACCAGCC AGAACGCCTG AACGCAGGCA CATACTTCCT
 ATTCTACACC CTAGTAGGCT CCCTTCCCCT ACTCATCGCA CTNATTTACA CTCACAACAC
 CCTAGGCTCA CTAAACATTC TACTACTCAC NCTCACTGCC CAAGAACTAT CAAACTCCTG
 AGCCAACAAC TTAATATGAC TAGCTTACAC AATAGCTTTT ATAGTAAAGA TACCTCTTTA
 CGGACTCCAC TTATGACTCC CTAAAGCCCA TGTCGAAGCC CCCATCGCTG GGTCAATAGT
 ACTTGCCGCA GTACTCTT
 R
 AANCTAGGCG GCTATGGNAT AATACGCCTC ACACTCATTC TCAACCCCCT GACAAAACAC
 ATAGCCTACC CCTTCCTTGT ACTATCCCTA TGAGGCATAA TTATAACAAG CTCCATCTGC
 CTACGACAAA CAGACCTAAA ATCGCTCATT GCATACTCTT CAATCAGCCA CATAGCCCTC
 GTAGTAACAG CCATTCTCAT CCAAACNCCC TGAAGCTTCA CCGGCGCAGT CATTCTCATA
 ATCGCCCACG GNCTTACATC CTCATTACTA TTCTGCCTAG CAAACTCA

  Submitted Frequency for ss46525719 back to top
There is no frequency submission for ss46525719.


  dbSNP summary of Genotypes for ss46525719 back to top
No sufficient data to compute Hardy-weinberg probability for ss46525719.


  Submitted individual genotype for ss46525719 back to top
There is no individual genotype data for ss46525719.

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