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Submitted SNP(ss) Details: ss48415348           
Submitter
HandleAPPLERA_GI
Submitter SNP IDhCV25934188
RefSNP(rs#)rs35497285
Submitted Batch ID1-1
Submitted DateNov 30, 2005
Publication Cited[1] Natural Selection on Protein Coding Genes in the Human Genome
First entry to dbSNPSep 28 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodAGI_ASP PIPELINE
Ascertainment Samplesize74
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 3
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss48415348|allelePos=301|len=601|taxid=9606|alleles='G/A'|mol=Genomic
 TTGATGGCTC TCATTCCCTG GCTCAGACCT GAGGTGCTCA CCCAGTTCCA GCCATGCCCA
 CCTACCCCAG CCATCTCTCC ATTGACCAAA CCTCGGAGAT CCTGCAGCCT GGCCAACTCC
 TTCTCTCTTC CAGGAGATCA GCTGGTTCCA GGAGTCCCAG GCCCCTCCTC TGAGGCAGAG
 GACGACCCAG GAGAGGCGTT TGAGTTTGAT GACAGTGATG ATGAAGAGGA CACCAGCGCA
 GCCCTGGGCG TCCCCAGCCT TGCTCCTGAG AGGGACACAG ACCCCCCACT GATCCACTTG
 R
 ACTCCATCCC TGTCACTGGT AAGATGTTTC TGGGAACTTC CGGTCCTGGG GCTACAGGGA
 GCATGGAGAA CTGGGCGGAA GCTCCAGGCT CTCAGGGATG CCTGGTGGCC CCTCCGCTGT
 CCCCAGAAAG CAGGAAGGGA AAAGCCAGTG GGAAGAAGCT GCAGTCTGTG GCTTCCCTGG
 TGAATTGGAA ATTCCTAGCA TTCCTGCAAC ATCTGGCGCA CTTTGGCACA TTGTAAATGG
 AAGTGGTTGG CCTGAGTTTT GCTTTGGAGA CAGTTGCTGC CCAGAGCTTG TGTCTCTGAA

  Submitted Frequency for ss48415348 back to top
There is no frequency submission for ss48415348.


  dbSNP summary of Genotypes for ss48415348 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
AGI_ASP population
- NORTH AMERICA 		7272G=0.94444442
A=0.05555556G/G=0.88888890
A/G=0.11111111
Pr(chiSq=0.013,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss48415348 back to top
There is no individual genotype data for ss48415348.

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