>gnl|dbSNP|ss48418332|allelePos=301|len=601|taxid=9606|alleles='T/C'|mol=Genomic
AGGGGTTCCT GGTTCTCCGC TGAGCCCGGC TGCTGCAGGG CTTAATGGGA CAAGTGGTCG
CGACTGGACT CAACCTGGCC CGTGCGTGGG CTGTGCAGAC ACGGGTGTTG GGGGTGACCC
GGCCGAGTCC TGCCCTGCAG CATTCTCCCC TGTGGCCACT GTGCTGACTG GGCCGGTGGT
CCCCAGGGAG CGCATGAACC TGAAGGTGCC CATCTACTTC TCCACGGGGC TGACCGAGAA
GGCCAACCAC TACTACAAGC TGTTCATCCC CTGGACCAAC CAGAAGATCC GCAAGACTTT
Y
GTGCAGAGGA ACATGTTTGA GTTCAAGCAC ATCAAGGCCT TCGACCGGGC TTTTGCTGAC
AACCCAGGAC CGATGGTGAG GCCCGCGGCA GGGCCGGCCA GCACATCCAC ACCCGTCGGT
CTCCTGTCTT CCGCAGGTGT CTGGGCTTGG GCCTGCAGTG GGGGTGGGGG CATCTGCTGC
CCTGACCCCC CACCTGGCCC TGTGTGTCCT GTAGGTTGTG TTTGCCACGC CAGGAATGCT
GCACGCTGGG CAGTCCCTGC AGATCTTCCG GAAATGGGCC GGAAACGAAA AGAACATGGT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.81415927
| C=0.18584071 | T/T=0.65486723
C/T=0.31858408
C/C=0.02654867
| Pr(chiSq=0.315,df=1)
=0.584 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.95348835
| T=0.04651163 | C/C=0.90697676
C/T=0.09302326
| Pr(chiSq=0.009,df=1)
=1.000 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | C=0.99418604
| T=0.00581395 | C/C=0.98837209
C/T=0.01162791
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.98230088
| T=0.01769911 | C/C=0.96460176
C/T=0.03539823
| Pr(chiSq=0.001,df=1)
=1.000 | Genotype
Freq. |
AGI_ASP population
- NORTH AMERICA | 74 | 74 | T=0.51351351
| C=0.48648649 | T/T=0.40540540
C/C=0.37837839
C/T=0.21621622
| Pr(chiSq=11.906,df=1)
=0.001 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | C=0.80612242
| T=0.19387755 | C/C=0.69387758
C/T=0.22448979
T/T=0.08163265
| Pr(chiSq=3.891,df=1)
=0.050 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.98780489
| T=0.01219512 | C/C=0.97560978
C/T=0.02439024
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.97058821
| T=0.02941176 | C/C=0.94117647
C/T=0.05882353
| Pr(chiSq=0.005,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.63068181
| T=0.36931819 | C/T=0.51136363
C/C=0.37500000
T/T=0.11363637
| Pr(chiSq=0.840,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.93333334
| T=0.06666667 | C/C=0.86666667
C/T=0.13333334
| Pr(chiSq=0.059,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | C=0.52999997
| T=0.47000000 | C/T=0.46000001
C/C=0.30000001
T/T=0.23999999
| Pr(chiSq=0.294,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.82867134
| T=0.17132868 | C/C=0.69930071
C/T=0.25874126
T/T=0.04195804
| Pr(chiSq=1.127,df=1)
=0.294 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.85227275
| C=0.14772727 | T/T=0.72727275
C/T=0.25000000
C/C=0.02272727
| Pr(chiSq=0.005,df=1)
=1.000 | Genotype
Freq. |
