>gnl|dbSNP|ss48420538|allelePos=301|len=601|taxid=9606|alleles='T/C'|mol=Genomic
GGGAATGCTG GCTGAAAGTG AAGGCAAATA CCCTTATGTA TCTGGCTAAG GCGGATCCAG
ATTGCTCTTT TGCCATCTAA GTTTGCCTGA AGTGGGGCCC ACCCATCACA GGGCCAAGGC
TCCCTCCTCC CTATCCCCTC TTCCTATTCC TGAACCAGCA GCACCTGCCC CACCCCAGGC
CCCTGCTCTG CTCCCAGCCG CCCTTCCCTC CATCCCACGA CAGCTAGGAA TTACGTGGGG
CAGGACACGC AGCCATCGCC ATGTTCATAG AAGCCAGGCA GGCAGGTCCC ACAGTCAGTA
Y
CTCTGCGGGA ACCTGCAATC CAGGAGAGGC ATGCGTCACC ATGGGACAGG AGTGGGTCAG
GCAGGGAGAA GGGGGTCTGG GAGTAGAGAG CCCTGGGTGG GGGTACTCAC AGAGTAGCCG
TGTGTGGCGG TGCAGGGCCC CGCAGTCTAG GCATGGTTGG CAGTAGAAGG GTGAACTGCT
GACACATTGG CTGACCTGGC ACTCCACAAA CCAGCCTGGC TTACAGCCAC AGCGGGTGTC
GGCCACTGCT GAACAGTTCT CCAGCGCCAC CTGGGAGGCT GGTGGGGGTG CAGGGAGATG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.92477876
| C=0.07522124 | T/T=0.84955752
C/T=0.15044248
| Pr(chiSq=0.108,df=1)
=0.752 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | T=0.98837209
| C=0.01162791 | T/T=0.97674417
C/T=0.02325581
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.98255813
| C=0.01744186 | T/T=0.96511626
C/T=0.03488372
| Pr(chiSq=0.001,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.80530971
| C=0.19469027 | T/T=0.66371679
C/T=0.28318584
C/C=0.05309734
| Pr(chiSq=1.061,df=1)
=0.317 | Genotype
Freq. |
AGI_ASP population
- NORTH AMERICA | 74 | 74 | T=0.85135138
| C=0.14864865 | T/T=0.72972971
C/T=0.24324325
C/C=0.02702703
| Pr(chiSq=0.056,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.70408165
| C=0.29591838 | C/T=0.55102038
T/T=0.42857143
C/C=0.02040816
| Pr(chiSq=5.091,df=1)
=0.025 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | T=0.98780489
| C=0.01219512 | T/T=0.97560978
C/T=0.02439024
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | T=0.85795456
| C=0.14204545 | T/T=0.76136363
C/T=0.19318181
C/C=0.04545455
| Pr(chiSq=3.786,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.81666666
| C=0.18333334 | T/T=0.66666669
C/T=0.30000001
C/C=0.03333334
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.93000001
| C=0.07000000 | T/T=0.86000001
C/T=0.14000000
| Pr(chiSq=0.038,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.85314685
| C=0.14685315 | T/T=0.72727275
C/T=0.25174826
C/C=0.02097902
| Pr(chiSq=0.003,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.91477275
| C=0.08522727 | T/T=0.82954544
C/T=0.17045455
| Pr(chiSq=0.125,df=1)
=0.752 | Genotype
Freq. |
