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Submitted SNP(ss) Details: ss48429795           
Submitter
HandleAPPLERA_GI
Submitter SNP IDhCV25985061
RefSNP(rs#)rs12028811
Submitted Batch ID1-1
Submitted DateNov 30, 2005
Publication Cited[1] Natural Selection on Protein Coding Genes in the Human Genome
First entry to dbSNPSep 28 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodAGI_ASP PIPELINE
Ascertainment Samplesize76
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss48429795|allelePos=301|len=601|taxid=9606|alleles='A/G'|mol=Genomic
 GCCTGCGACA CTCTGCCCTG GGACTCCTGA AACCTGAAGG CCAGCAGGCC TGACAAGGGA
 TGCTGGTGGC AGCCTGTGTC TGGAGCAGAG CCCTGCCCGC CTAGTCCCCA CTGCGCCTGG
 AGAGAGGATC AGGGCCGCCC TGCCAAGTTA GAAGGGAGAG CTGGGAGGAA GCTATGGCAC
 CCCCGCCTCC ATCCTGGAAG GCAGCCCCTT CCCACCTCAC CGTGGGGTCC CGCCAGCCCC
 ATGCTCTGCT GCTTACCGGG CCAGCACCTG CTGCTGGTCC ACAACGGGCA GCGGGTCATC
 R
 GTCAGCACTG CCACCTCCAT GCCCACGCTC TCCCTCTTCA CACCAGCTGT GGCCGGCAGG
 GGCTCAGGCT GAGCCACCAG GGCCACCGGG GCCTGAGCCT CCAACCACAC GCCAGGCTCT
 GCTGTCCGCA CCACCTCTAA GGCCACTTCC GAGGCCAGAT CTACCTCCTG AGTGTGAAGA
 GAAACCCAGG TGGAGGTGGG AAGGCCGCCC CAACCCCCGC CGACAGCTCC CAGGTGGCTC
 AATCCCAGAC GGGGCCATTC CGCCTGCTGC AGCCCCGACA GATCACCTCC AGCTCAGGGA

  Submitted Frequency for ss48429795 back to top
There is no frequency submission for ss48429795.


  dbSNP summary of Genotypes for ss48429795 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
AGI_ASP population
- NORTH AMERICA 		7676A=0.84210527
G=0.15789473A/A=0.71052629
A/G=0.26315790
G/G=0.02631579
Pr(chiSq=0.004,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss48429795 back to top
There is no individual genotype data for ss48429795.

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