NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss490962661           
Submitter
Handle1000GENOMES
Submitter SNP ID20110521_exome_470459_chr8_27320526
RefSNP(rs#)rs56344740
Submitted Batch IDphase_1_exome_sites_20110521
Submitted DateFeb 10, 2012
Publication CitedN.D.
First entry to dbSNPFeb 10 2012 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodEXOME_CAPTURE
Ascertainment Samplesize2256
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginA:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss490962661|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 CCAGCTACAT GTGCTCTCTT GCTATTTATT CCATCTAAGG ACCATGACTG AGGAAAGTGG
 GCCTTCACGA GAGGGGCCTG GGCTGCCCAA GCTCACACTC TGCGGTAAGG TGGTTCCCCG
 CTAAGTTGGT GGGGCCACCC AGGCTGGCGC CTCTCCCAAC CCCAACGCAC CGAAGAGTCA
 GCATCCTCAG ACCGCAGGTG
 K
 TCGGCAATGT AGTGCACACC TTCCAGTGCC TTCTGCATGT GGGGTGATAG CAGCAGCTCA
 CCCTCCTGCA GCAGAGCCTC AGCCTTGGGA CCTGAGGCCC CAGAGTGCAG GTGGCCGTGG
 CTGCAGAGGG TGCCCACAGA GGGGGCCACA TGACCTGCAC ATGCCCATCT GTCCTCCTCC
 TCCACCACCA CCTCCCTCTC

  Submitted Frequency for ss490962661 back to top
There is no frequency submission for ss490962661.


  dbSNP summary of Genotypes for ss490962661 back to top
No sufficient data to compute Hardy-weinberg probability for ss490962661.


  Submitted individual genotype for ss490962661 back to top
There is no individual genotype data for ss490962661.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement