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Submitted SNP(ss) Details: ss491235554           
Submitter
HandleGSK-GENETICS
Submitter SNP IDchr1_152815444
RefSNP(rs#)rs78691486
Submitted Batch IDFEB_2012A
Submitted DateMar 02, 2012
Publication CitedN.D.
First entry to dbSNPMar 2 2012 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTARGETTED_CAPTURE_SOAPSNP
Ascertainment Samplesize28004
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss491235554|allelePos=252|len=503|taxid=9606|alleles='G/A'|mol=Genomic
 ACACACAGCA GCTCCAACCT GGAGGCTGGA CCAACTGCTT TGTTTTGGCT GCTCTCCATC
 TCTTGTACCA GCCCAGGCAA TAGTGTTGAG GAGGGGAGCA AGGCTGCTAA GTGGAAGACA
 GAGATGGCAG AGCCATCCAC CCTGAGGAGT GATGGGCAAG GGGCCAGGAA GGGGACAGGA
 TTGTCTGCTG CCTCCAAGTC ATGGGAGAAG AGGGGTATAG GACAAGGGGT GGAAGGGCAG
 GAGCTCACAC C
 R
 CACCGGGCTG GCCTGACACA ATGGTAGCTC TGAAGGGAGG GGAAGAGAGA GGCCTGGGTG
 TGACCTGACA CCTGCCGCTG CTTGAGTGGA CAGCAGCTGG ACTGGGTGGG CCCCACAGTG
 GTCAGCGATT CCTGCCAAGT AGGGTTTAGC CGGGCCCCAT GGTCACAGAC CCCTGGGGGA
 GGCTTCCAGC TCAGTCCCAC AGCCCCTTGC TTCTAAGGGA TCCAGAGACC TGCTCCAGAT
 CCTCTTTCCC C

  Submitted Frequency for ss491235554 back to top
There is no frequency submission for ss491235554.


  dbSNP summary of Genotypes for ss491235554 back to top
No sufficient data to compute Hardy-weinberg probability for ss491235554.


  Submitted individual genotype for ss491235554 back to top
There is no individual genotype data for ss491235554.

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