Submitter Handle CLINSEQ_SNP Submitter SNP ID SNV-chr1-1239050 RefSNP(rs#) rs12142199 Submitted Batch ID Submission1_FEB2012 Submitted Date Mar 06, 2012 Publication Cited 19602640 First entry to dbSNP Mar 6 2012 12:00:00:000AM Resource Links Submitted Gene Name N.D Submitted Gene ID N.D. Submitted SNP Synonyms N.D Submitted linkout N.D Assay Species Homo sapiens Molecular Type Genomic Method AGILENTWHOLEEXOME Ascertainment Samplesize 1322 Population CSAgilent Allele Observed Allele G/A Ancestral Allele N.D. Allele Origin N/A SNP Class SNV CpG Code N.D. Validation Validation Status HWE Goodness of Fit not applicable Variation Frequency Submission population count: 1 Genotype Summary population count: 1 Genotype Submission N.D. Haplotype N.D.   Fasta sequence   (Legend) >gnl|dbSNP|ss491582021|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic TGAACTCAAA CATGTTCCTC TGCAC R AAAGTCTTGC GGATCTTCTG GTTGG   Submitted Frequency for ss491582021 Population ID  -Class Sample (2n) Major Allele Freq. Minor Allele Freq. Estimated Heterozygosity +/-std.err. Genotype Freq. Submitted Hetero- zygosity Submission Batch Submitter CSAgilent - EUROPE 1322 A/A=0.66700000 A/G=0.28400001 G/G=0.04800000 Submission1_FEB2012 CLINSEQ_SNP   dbSNP summary of Genotypes for ss491582021 Population ID  -Class Total Sample (2N) Founder (2N) Major Allele Freq. Minor Allele Freq. Genotype Freq. HWE Goodness of Fit Data Source CSAgilent - EUROPE 1320 1320.67798614502 A=0.80980980 G=0.19019020 A/A=0.66766769 A/G=0.28428429 G/G=0.04804805 Pr(chiSq=3.926,df=1) =0.050 Genotype Freq.   Submitted individual genotype for ss491582021 There is no individual genotype data for ss491582021.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement