>gnl|dbSNP|ss5173158|allelePos=154|len=921|taxid=9606|alleles='C/T'|mol=Genomic
TATGAGTAAT TGTATCTCAC CAGCAGTAAC ACACTGTTGT ACCTCTTGTT TTCACATGTG
CTTCTCCTTA TTAGACTATA AACTCCATTC ACCATCTTTC TGGAGCTGTC ATCTTTCATT
AGGAACATCG TAATAGCCTT TCAGCTAGTA GCC
Y
GCCCCCCTCC ACTGTTACCT GCTTTTGAAG TGATTCTCCC CATCTCCAGA GTAAGTGGGC
TCATCAAACT ATGCTTCTCT GTGTGAAAGG TGTGGTGGTG GGAACTGGGT GAAATTAGCT
CCAGGACACC ATTAGCACTT GGTCTAATTT ATTTACTACA GTAGGTATCC ATGTGCTGAG
AGGTTCTCAA GAAGGATGGG GAGTGGGGAA GAGTAGGAGT AAGTGGAGAA AGTAGGGGCT
GGAAACTAGG TGAAGAATCA GAATCAGGTG TAGACAGCCA TACGAGTCAC AGATCTGAAA
AGGTCGAGTT AGCCAGAGTT CAACCAGGGC TGCCAGAACT TGTGTGGTTA GGGTGTGCCA
GGCAGTGCCG TTAGGAGCTT CCATGTATTC AAGGGTTGGA GTGGTCATGA AATGAGAAAA
CGCTGTGCAG TGACAAAAAG TAGTTGCAAA ATTCTGAGTT TGGAGCCGAG AGGAACATAC
ACTGTGGGAG ATACAACGAG CAGCCTAAGT CAGAGTCTTG TCAAAATCCA TTTCATGAAA
AGCTGAACTT TCAAAATAGT GTAGTTATAT TTGGTGCATT GCAATGCCAC ATAATTTCCT
CCTTGACCAC TATATTAAAG GGTTGCTTTC AAACGTCTTC CCCAAATGGT AAACATGATT
CCAAGTGGTT TAAGTTCACA TTTCTGTCAA CAGAAATTTA ACTTTTGTGG TTCTGATGGG
TGAGAAGTGA TAACTCAGGA TTACTTTAGT TTGGATCTTT CTGATTA
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.68141592
| C=0.31858408 | C/T=0.46017700
T/T=0.45132744
C/C=0.08849557
| Pr(chiSq=0.405,df=1)
=0.527 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 82 | 82 | T=0.58536583
| C=0.41463414 | C/T=0.39024389
T/T=0.39024389
C/C=0.21951219
| Pr(chiSq=1.576,df=1)
=0.251 | Genotype
Freq. |
| HapMap-JPT | 168 | 168 | T=0.51785713
| C=0.48214287 | C/T=0.36904761
T/T=0.33333334
C/C=0.29761904
| Pr(chiSq=5.721,df=1)
=0.020 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.77876109
| T=0.22123894 | C/C=0.60176992
C/T=0.35398230
T/T=0.04424779
| Pr(chiSq=0.084,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-ASW | 96 | 96 | C=0.72916669
| T=0.27083334 | C/T=0.50000000
C/C=0.47916666
T/T=0.02083333
| Pr(chiSq=3.395,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | T=0.54878050
| C=0.45121950 | C/T=0.46341464
T/T=0.31707317
C/C=0.21951219
| Pr(chiSq=0.169,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.55882353
| C=0.44117647 | C/T=0.48235294
T/T=0.31764707
C/C=0.20000000
| Pr(chiSq=0.040,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 174 | 174 | T=0.55747128
| C=0.44252872 | C/T=0.51724136
T/T=0.29885057
C/C=0.18390805
| Pr(chiSq=0.203,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.71666664
| T=0.28333333 | C/C=0.48888889
C/T=0.45555556
T/T=0.05555556
| Pr(chiSq=1.334,df=1)
=0.251 | Genotype
Freq. |
| HAPMAP-MEX | 98 | 98 | C=0.60204083
| T=0.39795917 | C/T=0.51020408
C/C=0.34693879
T/T=0.14285715
| Pr(chiSq=0.205,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.58391607
| T=0.41608390 | C/T=0.49650350
C/C=0.33566433
T/T=0.16783217
| Pr(chiSq=0.068,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.74431819
| C=0.25568181 | T/T=0.56818181
C/T=0.35227272
C/C=0.07954545
| Pr(chiSq=0.488,df=1)
=0.527 | Genotype
Freq. |
